Trichoplusia ni (cabbage looper): 113493672
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Entry
113493672 CDS
T05757
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113493672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113493672
Enzymes [BR:
tnl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
113493672
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113493672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
113493672
NCBI-ProteinID:
XP_026727454
UniProt:
A0A7E5VGT8
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Position
1:9309167..9311765
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AA seq
331 aa
AA seq
DB search
MTWNKLKCNLRELQLVGTLSGGQSFRWAYNKENNEWIGVFSKTVWKLRENDDGLQYQVVG
SLHNTKTKMKSKQKESNIDFKKLLEDYFRLDTNLGNYYKEWSEKDELFRSACQQFYGIRM
LRQEPVENLFSFICSQNNHISRISTMVEKLCTHYGEKICEHEGNAYYAFPEVEKLTDQKV
ETELRDLGFGYRAKFIQKSASQIVEWGGVDWFNSLQDMKYKDAKVELMKLHGIGPKVADC
ICLMSLNHLEALPVDTHVYQIAAQNYLPHLRGKKSVTEKMYAEIGDHFRMLYGDMAGWAH
TVLFCADLKKFQQTDTESNESSKPKKKRKKL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaataaattgaaatgtaacttacgagaacttcaattggtgggaactttatct
ggaggtcaaagtttcaggtgggcatataataaagaaaataatgaatggattggtgtattt
tcaaagactgtttggaagttacgagaaaatgatgacggtttacaatatcaagtggttggc
tccttacacaacacgaaaactaaaatgaaaagtaaacaaaaagagtcaaatatcgatttt
aaaaagttactcgaagactattttcggttggatacgaatttgggaaattattataaagaa
tggtcagaaaaagatgaattgtttcgatcagcctgccaacagttctatggtataaggatg
ctccgacaagaaccagttgagaacctattctcctttatttgcagccagaataatcacata
tcaaggatatcaacaatggttgaaaagttatgcactcattatggagagaagatctgtgaa
catgaaggaaacgcatactatgcattcccagaggttgagaaattaactgaccaaaaggta
gaaacagaactgagagacttgggatttgggtacagagcaaagttcatacaaaagtctgca
tctcagattgtggagtggggcggcgttgattggttcaatagccttcaagacatgaagtat
aaggatgctaaggtcgagcttatgaagctgcatgggattggacctaaggtagcggactgc
atatgcctaatgtccctcaaccatctagaggcattaccagtagacacccacgtgtatcaa
atagctgcccagaactacctgccgcacttgcgaggcaagaagagcgtcacagagaagatg
tatgcggagataggagaccacttcagaatgctgtatggagatatggctgggtgggcgcat
acggtactattttgtgcagatttaaagaagtttcagcagacagacactgaaagtaatgaa
agcagcaaacccaaaaagaaaaggaaaaaactgtga
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