Trichoplusia ni (cabbage looper): 113496102
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Entry
113496102 CDS
T05757
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113496102
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113496102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
GBP
KAP_NTPase
nSTAND_NTPase5
nSTAND3
AAA_18
RsgA_GTPase
AAA_16
Glyco_tranf_2_3
MeaB
Motif
Other DBs
NCBI-GeneID:
113496102
NCBI-ProteinID:
XP_026731017
UniProt:
A0A7E5VRW7
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Position
7:1750713..1755832
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AA seq
483 aa
AA seq
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MADKKKKIFAPKEATTPRRPVILKSDRDTTKDPSKEKPEKEKQPTIILKTREQSTPKEER
PQSPKTIKSSTSEGDGPNPCKIAQNESKEKKGADQKPSPPLKYMTQPVKLLDENLELNTS
ALEFLHDSSTNYLVVGIMGTQGVGKSMILNLIATNVHDQNLCNLILNSHDIPADSTFDSN
DIAPLEKQMDTLEFADSPEKATEPNENIFKFKMQDIEQIEKGVHCTKGIDMYITNDRVIL
LDCQSLWSPSLIEESNTTITARSANVVTVDCLQIASYLMAICHVLIAVQDWFTDYNFLRY
IQAAEMLKPSLSASNSVSTSQEGSESTGGGESHPHLLLLHNRCQLEDFTPESLKIIQDLY
RKAFLKSNLQLNSGMYMYSDTNKNSLNVDSVCKGYSVDTCGTPINLFLLPEIYSDFDNRD
IYRGHPAFEQLAKRLRWMILGVNRHQITNVPNLSEKGWFHFCSKAWETIRKCTFFMEYER
FLP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaaaaagaaaatatttgctcccaaggaagcaacaactccaagaaggcca
gtgattttgaaatctgatcgtgatactacaaaagatccaagcaaggagaaaccagagaaa
gaaaaacagccaactataatactaaagactagagaacagagcacaccaaaggaggagcga
ccccagagtccgaaaactatcaagtcttcaacatcagaaggagatggcccaaacccttgt
aaaatagcacaaaatgagagtaaagaaaagaaaggagctgaccaaaaaccttctccccca
ctgaagtacatgacacaacctgtaaagctgctggatgagaacttggaactgaacaccagt
gctttagagttcctccatgactcaagcactaattatctagttgttgggataatgggaact
caaggtgttggtaaatctatgatattaaacttaattgctacaaatgttcatgatcagaac
ctatgcaacctaatactaaattctcatgacataccagctgatagcacatttgacagtaac
gatatagctcccctggagaaacaaatggatacactagagtttgcagattcgcctgagaag
gcaactgaaccaaatgaaaatattttcaagttcaaaatgcaagacattgagcaaattgag
aaaggtgttcattgtactaaaggtattgacatgtatatcacaaatgatcgagtaattctc
ctggactgccagtccttatggtcaccgtcgcttatcgaggagtccaacacaacaatcaca
gcaagaagtgctaacgtggtgacagtggactgtctgcaaatcgcttcgtatctcatggct
atatgtcatgtgctaatcgccgtgcaagactggttcactgactataattttctcagatac
attcaagctgctgagatgctaaagccttcgctgtcagcctccaactccgtatcaaccagt
caagaggggtcagagtccacgggcggtggtgagagtcacccacacttactcctactacac
aaccgctgccaactcgaagattttactcctgagagtttgaaaattatacaagatctatat
agaaaagcattcctcaaatccaacttgcaactcaactcaggaatgtacatgtacagcgat
acgaacaagaatagtttgaacgtcgacagcgtttgcaaggggtacagcgtagatacctgt
ggaacgcccattaatctatttctactgccggaaatctacagtgactttgataaccgtgat
atatacaggggccatccagcattcgaacaactagcgaaacgtcttcgttggatgatactc
ggcgtcaacagacatcaaattacaaacgtacctaacctatctgaaaaaggatggttccat
ttctgcagcaaggcttgggaaaccataagaaagtgcacgttcttcatggagtacgaaagg
ttcctaccgtga
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