Thermotoga petrophila RKU-10: Tnap_0025
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Entry
Tnap_0025 CDS
T01139
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K02405
RNA polymerase sigma factor FliA
Organism
tnp
Thermotoga petrophila RKU-10
Pathway
tnp02020
Two-component system
tnp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tnap_0025
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tnap_0025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnp03021
]
Tnap_0025
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tnp02035
]
Tnap_0025
Transcription machinery [BR:
tnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tnap_0025
Bacterial motility proteins [BR:
tnp02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tnap_0025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_23
HTH_36
GerE
Arc_C
HTH_38
HTH_3
HTH_10
Rv2175c_wHTH
Phage_terminase
HTH_24
Sigma70_ECF
HTH_28
TnsD
HTH_WhiA
Sigma54_DBD
MarR_2
CENP-B_N
LacI
Motif
Other DBs
NCBI-ProteinID:
ADA66133
UniProt:
D2C597
LinkDB
All DBs
Position
23520..24182
Genome browser
AA seq
220 aa
AA seq
DB search
MWDKESMIRSLLPFIKRTAEDLAQTLPPNVEVDDLIQEGIVAALSSLERYDPSKASFTTF
IMKRVKGAMYDYLRKIDWMPRNLRKNVKMIERAIYESEEFPSDEEIARKTGLELKEVVRA
RNEMMRKQLLMIDAMEDEIVLKTEGPDENAYRELLVEEMKKAIEKLSDKEKLVLSLRFEK
DLSLKEIAKVLDVSESRVSQIISKSLLKIKKEVMGDDQAG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggacaaggaaagtatgataagaagcttgcttccgtttataaagagaacagctgag
gatttggcacagaccctacctccaaacgtggaggtagatgatctgattcaggaaggaatc
gtcgcagccctgtcttctctggaaagatacgatccatcaaaagcgagtttcacaacgttc
ataatgaaaagagtgaaaggtgccatgtacgactatttgagaaaaatagactggatgccg
aggaatctgagaaaaaacgtgaagatgatcgaaagagcgatatacgaaagcgaggagttt
ccatccgatgaagagatagccagaaaaaccggtcttgaattgaaggaagtcgttcgtgca
agaaacgagatgatgaggaagcaacttctcatgatagatgcgatggaagacgaaatcgtt
ctgaaaacagaggggccagacgaaaacgcgtaccgtgaacttctggtggaggagatgaag
aaggcaatagaaaaactctcggacaaagaaaagctggttctgtctctcagattcgaaaag
gatctatctttgaaagagatagcgaaagtactggatgtttctgaatcccgtgtttctcag
attataagtaagtcccttctgaaaataaagaaagaagtgatgggcgatgatcaggccggt
tga
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