Talpa occidentalis (Iberian mole): 119234635
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Entry
119234635 CDS
T07495
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119234635 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tod00536
]
119234635 (COL13A1)
Glycosaminoglycan binding proteins [BR:
tod00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119234635 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119234635
NCBI-ProteinID:
XP_037353583
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKLGHPGPKGE
MGLTGPRGHPGPQGQKGEKGQCGDYPHREYLSSTLAALRSNQIITLKGEQGQAGIQGPPG
PPGPPGPSGPLGHPGLPGPIGPPGLPGPPGQKGDPGIQGYHGRKGERGMPGMPGKHGAKG
SPGIAVAGMKGEPGTPGAKGEKGAAGSPGLLGLLGQKGEKGDAGNSIGAGRGEPGPPGLP
GPPGPKGEAGVSGQAGPPGQQGEKGEPGATGEQGPAGPKGPKGEPGKGEMVDYNGNINEA
LQEIRTLALMGPPGLPGQIGPPGAPGNPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGP
QGPPGKTGPAGAKGEDGHTGSPGEKGAKGEPGQAGSPGLDGPTGEKGEPGDQGRPGATGL
PGPIGLPGFTGEKGEPGEKGDPGVEVPGPPGPEGPPGPPGLQGIPGPKGEAGLDGAKGEQ
GAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPMGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggtgcccctggagacgca
ggcatgtccatcattggtccccgaggccctccaggtcagccgggcactcgaggtttccct
ggatttccgggccccattggtctggacggcaaattgggccaccctggacccaaaggggag
atgggtctgacgggtccccgaggacatccgggacctcaaggacaaaaaggagaaaagggc
cagtgtggagactacccacaccgggagtacctaagcagcactcttgcagctctgcgctcc
aaccagataattaccctaaagggtgaacagggccaggccggcatccaaggcccaccaggg
ccaccaggcccccctggacccagtggacctctgggacacccaggattgccagggcccata
gggccccctggtttacctgggcctcctggacaaaagggagacccaggaatccagggctac
catggccggaagggagaacgtggcatgccggggatgccgggcaaacacggagcgaagggg
tctcctggaatcgctgtggccgggatgaagggtgagccagggaccccaggagccaagggc
gagaagggggctgctggatcccctgggctcctcggcctcctggggcagaagggagaaaaa
ggcgatgctggcaactccattggtgcaggcagaggggagcccgggcctccagggctcccc
gggcccccagggccgaagggagaagctggtgtcagtggccaggccggtcccccaggacag
caaggagaaaagggggagcctggagcaactggagagcagggaccagctggccccaagggc
cccaagggagaaccagggaaaggagagatggtggattacaatggcaacatcaacgaggcc
ctgcaggagatccgaacgctggcattgatggggcctcctggtcttcctgggcaaatcggc
ccacccggagctccagggaacccaggccagaagggggagattggactgccaggccctcca
ggacatgatggagagaagggacctcgaggcaaaccaggagacatgggtcctcctggcccc
caaggccccccaggaaagacagggcctgcaggggcgaagggagaagatggacatacaggc
agcccaggagagaagggggcaaaaggggagccggggcaagcaggctcaccgggtctagac
ggcccaactggggagaaaggagaaccaggtgaccaagggagacctggagcgacaggactg
cctggcccaattgggctcccaggatttacaggggagaaaggagaacccggggagaagggc
gacccaggagtggaggttcctggaccaccagggccagaggggcctcctggacctccgggg
ctgcaaggcattcctggaccaaagggggaagcaggactggatggagcaaaaggcgaacag
ggcgcccagggggaaaaaggagaccgagggcctctgggactacccggagcttcaggtttg
gacggcaggcctgggccaccgggtactccaggaccaattggagttccaggcccagcagga
ccaaagggcgagaggggcagcaaaggcgaccctgggatgacaggaccaatgggagcggct
gggcttcctggtttacatggaccacccggggacaaaggaaaccggggggagagggggaag
aaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcc
ccctgcccgttgggcgaagatggcctaccagtccagggctgctggaacaagtga
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