Talpa occidentalis (Iberian mole): 119249246
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Entry
119249246 CDS
T07495
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119249246 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119249246 (CNOT1)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119249246 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119249246 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
119249246
NCBI-ProteinID:
XP_037372330
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADFPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQIPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTAALISSHLATSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLA
PHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALD
SEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQA
AAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAE
RMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQI
YDKCITELEQHLHAIPPALAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLD
ATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVDLL
IRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERTVAHVTEADLFHTIETL
MRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREK
AEYLLREWVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTE
MCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLN
KVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFH
ILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVEL
TKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPD
PFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSN
EPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRY
LFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLI
TFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaagaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaatttcatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctgaag
ttaagtaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
cttagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtgttgaagaatgtcgcaatataatcatgcagttc
ggtgtgcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattgcagagtatctctgctcctggcagtgggatc
tggagcgatggaaaagataaaagtgatggagctcaggcacacacgtggaatgtggaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaacttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtctgggcatggaggtgttcccagtagacctcatatatagaccttggaag
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgattttccctgtcacactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctc
gcagaggtggggcagtatgagcaagtcaaacaactcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaattaacacctcctggcataccttgcgccat
gaactcatctccactctgatgccaattttccttgggaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccggcaacttatcatgcat
gcaatggcagaatggtacatgcgaggggaacaatatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggctttgtcaatgctgctaaatggtactccatttgct
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctgacagataagattcgagagcatggagagccttttatccaggcatgtatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcaacccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccatcctcaccatggttgccaattgcagtaatgtc
atgaacaaggccagacaaccgccacctggagtaatgccaaaaggacgaccccctagtgct
agcagcttagatgccatttctccagttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgccttcagtacccctcaatcaccagcaaaagcatttccacctctttcaacccca
aatcagacaacagctttcagtggtattggaggactttcatcacaacttccagtaggtggt
cttggtacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaattgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtatggccagaggcaaaccagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagagatttaaagactctacc
ataaagagagaacgagaagtatttaattgtatgctgaggaatttgtttgaagagtatcgg
ttttttccccaatatcctgataaagagttacatataacagcctgcctttttggggggata
atcgaaaaaggactggtcacttacatggcactaggtctggccctgcggtatgttctcgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccacagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaagcc
caggctcaggcccagattccagcaaaagctccccttgctggtcaggttagcaccatggta
accacttcgacaaccaccactgttgctaaaacggttacagtcaccaggccaaccggagtc
agctttaagaaagatgtgccaccctctattaatactacaaatatagatacgttgcttgtg
gccaccgatcaaactgagagaattgtggagcccccagaaaatattcaagagaaaattgct
tttatcttcaacaatctctcacagtcaaatatgactcaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacagtacctggttatgaagagagtcagt
attgagccaaactttcatagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaacaagatggttctaaatgaaacctatagaaacattaaagtgctcctgacctctgat
aaagctgcagccaatttctctgatcgctctctgctgaagaacttgggacattggctagga
atgatcacactcgctaaaaataaacccatcttacatactgacttggatgtaaaatctttg
ctgctagaagcttatgttaaaggacagcaagagttgctctacgtagtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaagaacatgacttgaagttaaacttgaag
tttgagattgaagtcctctgcaagaaccttgcattagatatcaatgaactgaaacctgga
aacctcctaaaggataaagatcgcctaaagaatttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcaccaccacaactgctgctttaatc
tcttcacatttagcaacttctacaacaccagctaccagtaccacctgtacagccacggtt
ccaccacagccacagtacagctaccatgacatcaatgtctattcccttgcaggcctggca
ccacacattactctaaacccaacaattcccttgtttcaggcccatccacagttgaagcag
tgtgtacgccaggcaattgaacgagctgtccaagagctggtccatcctgtggtggatcgt
tcaattaagattgccatgactacttgtgagcaaatagtcaggaaggattttgccctggat
tctgaggaatctcgaatgagaatagcagctcatcatatgatgcgtaacttgacagctggg
atggctatgattacttgcagggaacctttgctcatgagcatatctaccaacctcaaaaac
agttttgcctcagcccttcgtactgcatctccacaacaaagggaaatgatggatcaggca
gctgctcagttagctcaggacaattgtgaattagcttgttgttttattcagaagactgca
gtagaaaaagcaggccctgagatggacaagagattagcaactgaatttgagctgagaaaa
catgctagacaagaagggcgcagatactgtgatcctgttgtgttaacatatcaagctgag
cggatgccagagcaaataagactgaaagttggtggtgtagacccaaagcagctggctgtt
tatgaagagtttgcacgtaatgtgcctggcttcttgcctacaaatgatttaagtcaaccc
acaggatttttagctcaacccatgaagcaagcctgggcaacagatgatgtagctcagatt
tatgataagtgcattacagaactggagcagcacctacatgccatccctccagctttggcc
atgaatcctcaagcccaggctcttagaagtcttttggaggttgtggtgttatctcgaaac
tctcgggatgctattgctgctcttggattgctccagaaggctgtggagggcttactagat
gccacaagtggtgctgatgctgacctactgctgcgctatagggaatgccacctcttggtt
ttaaaagctcttcaagatggccgagcatatgggtctccatggtgtaacaaacagattaca
aggtgcctaattgaatgccgggatgaatataaatataacgtggaggctgtggatttgcta
attcgcaatcatttggttaatatgcaacaatatgaccttcacctagctcagtcaatggag
aatggtttaaactacatggctgtggcatttgctatgcagttagtaaaaatcctgctggtg
gatgaaaggactgttgcccacgttactgaggcagatctgttccataccattgaaactcta
atgaggattaatgctcattccagaggcaatgctccagaaggattgccccagctgatggaa
gtagtgcgatccaactatgaagcaatgattgatcgtgctcatggaggccctaacttcatg
atgcattctgggatttctcaagcctcagagtatgatgatcctccaggcctgagggagaag
gcagaatatcttctgagggaatgggtgaatctctaccattcagcagctgctggccgtgac
agtaccaaagctttctctgcgtttgttggacaggtagagcttttggaaagaaagatgcac
cagcaaggaatcctgaagacagatgatctcataacaaggttctttcgtctgtgcactgaa
atgtgtgttgaaatcagttaccgtgctcaggcagagcagcaacacaatcctgctgctaat
cccaccatgatccgagcaaagtgctatcacaacctggatgcctttgtccgactaattgca
cttctagtgaagcactcaggggaggccacaaacactgtcactaagattaatctgctgaac
aaggtccttggtatagtggtgggagttctcctacaggatcatgatgttcggcaaagtgaa
tttcaacagcttccctatcatcgaatatttataatgctgctcctggaactcaatgcacct
gagcatgtattggaaactattaatttccagacactcacagccttctgcaatacattccat
atcttgaggcctaccaaagctcctggcttcgtgtatgcctggcttgaactgatctcccat
cggatatttattgcaagaatgctggcacatacgccacagcagaagggatggcctatgtat
gcacagctactgattgatttattcaaatacttagcgcctttccttagaaatgtggaactc
accaaaccaatgcaaatcctctataagggcactttaagagtgctgttggttcttttgcat
gatttccctgagttcctttgtgattaccattatggattctgtgatgtgatcccacctaat
tgtatccagctaagaaatctgatcctgagtgcctttccaagaaatatgaggctcccagac
ccattcactcctaatctgaaggtggatatgttgagtgaaattaacattgcaccccggatt
ctcaccaattttactggagtgatgccacctcaattcaaaaaggatttggattcttatctt
aaaactcgatcaccagtcacttttctgtctgatcttcgcagcaacttacaggtatccaat
gagcctggtaatcgttacaacctccagctcatcaatgcactggtgctctatgtagggact
caggccatcgcacacattcacaacaagggcagcacaccttcaatgagcacgatcacccac
tcggctcacatggacatctttcagaacctggctgtggacttggacactgaaggtcggtat
ctcttcttgaatgcaattgcaaatcagctgcggtacccaaacagccacactcattatttt
agctgtaccatgctgtacctttttgcagaggctaacacagaagctatccaagaacagatc
acaagggttctcttggaacggttgattgtaaataggccacatccttggggtcttcttatt
accttcattgagctgattaaaaatccagcatttaagttctggaaccatgagtttgtacac
tgtgccccagaaattgaaaagctattccagtcggttgcacagtgctgcatgggacagaag
caggcgcagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
