KEGG   Talpa occidentalis (Iberian mole): 119255485
Entry
119255485         CDS       T07495                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
tod  Talpa occidentalis (Iberian mole)
Pathway
tod03013  Nucleocytoplasmic transport
tod04141  Protein processing in endoplasmic reticulum
tod04150  mTOR signaling pathway
tod05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:tod00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119255485 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119255485 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    119255485 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    119255485 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tod03019]
    119255485 (SEC13)
   04131 Membrane trafficking [BR:tod04131]
    119255485 (SEC13)
Messenger RNA biogenesis [BR:tod03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     119255485 (SEC13)
Membrane trafficking [BR:tod04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    119255485 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    119255485 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    119255485 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EML NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 119255485
NCBI-ProteinID: XP_037378602
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVVIWKEESGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEAKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWREEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGSTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSSSVTESQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtccgtgattaacacggtggacacctcccacgaggacatgattcacgacgcccag
atggactactacggcacccgcctggcaacctgctcatcggacaggtccgtcaaaatcttt
gacgtgcgcaacggagggcagatcctcatcgccgacctcagggggcacgagggccctgtg
tggcaggtggcctgggcccaccccatgtacggcaacatcctggcgtcctgctcctacgac
cgcaaggtcgtcatctggaaggaggaaagcggcacctgggagaagacccatgagcacacg
ggccacgactcctccgtgaactctgtgtgctgggccccccatgactacggtctgatcctg
gcctgcgggagctcggacggggccatctccctgctgacctacaccggggagggccagtgg
gaagccaagaagatcaacaatgctcacacgattggctgcaacgcggtcagctgggccccg
gccgtcgtgcccggaagcctcatagaccagccgtcgggccagaagcccaactacatcaag
aagttcgcatcgggcggctgcgacaacctcatcaagctgtggaaggaggaggaggacggc
cagtggcgcgaggagcagaagctggaagcgcacagcgactgggttcgcgacgtggcctgg
gcgccctccatcggcctgcccaccagcaccatcgccagctgctcgcaggacgggcgcgtg
ttcatctggacctgcgacgacgcctcgggcagtacgtggtccccaaaactgctgcacaag
ttcaatgatgtggtgtggcacgtcagctggtccatcaccgccaacatcctggccgtctcg
ggcggagacaacaaggtgaccctgtggaaggagtcggtggacggtcagtgggtgtgcatc
agcgacgtcaacaagggccagggctccgtgtcctcgtccgtcacagagagccagcagaac
gagcagtga

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