Thalassolituus oleivorans R6-15: R615_17435
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Entry
R615_17435 CDS
T03056
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tor
Thalassolituus oleivorans R6-15
Brite
KEGG Orthology (KO) [BR:
tor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tor03016
]
R615_17435 (gidA)
03036 Chromosome and associated proteins [BR:
tor03036
]
R615_17435 (gidA)
Transfer RNA biogenesis [BR:
tor03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
R615_17435 (gidA)
Prokaryotic type
R615_17435 (gidA)
Chromosome and associated proteins [BR:
tor03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
R615_17435 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Thi4
HI0933_like
Pyr_redox
AlaDh_PNT_C
NAD_binding_8
Pyr_redox_3
DAO
Motif
Other DBs
NCBI-ProteinID:
AHK17136
LinkDB
All DBs
Position
complement(3740793..3742691)
Genome browser
AA seq
632 aa
AA seq
DB search
MDYPVRYDVIVIGGGHAGTEAALAAARTGCKTLLLTHNTDTVGVMSCNPAIGGIGKSHLV
KEIDALGGAMARATDLAGIQFRILNSRKGPAVRATRAQADRALYRSAIRNIVENQPNLDI
FQAACDDLIVQGDGVGSTVCGVVTNTNMRIHATSVVLTAGTFLGGLIHIGMENHSGGRAG
DPPSNALSKRLREMPFNVGRLKTGTPARIDRRSVDFSVMQEQAGDTPLPVMSFMGSVSQH
PEQISCYVTHTNERTHEIIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVTRFADKTSHQIF
VEPEGLNSNELYPNGISTSLPFDVQLDLIHSMVGFENAHITRPGYAIEYDYFDPQDLKHS
LETKFVNNLFFAGQINGTTGYEEAGAQGLLAGVNAAMRALEKDAWVPRRDQSYIGVLVDD
LITMGTKEPYRMFTSRAEYRLVLREDNADLRLTEVGRDLGLVDDERWAAFSAKREAIEQE
VTRLKTTWVQPNTPEAAALLDMGEAAINHEYSLHDLLKRPGLDYAKVAQFKGEPVADPQV
AEQVEIQAKYDGYIARQLEEIEQSRRYESTKLPVDLDYDAIGGLSNEVKQKLRTLQPETL
GVASRLSGITPAAISQILIHLKKRNMATKMSA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtggattatcccgttcgctatgacgtcattgtgattggtggtggtcatgctggtactgag
gctgcattagcagcagcccgtactggctgtaagaccctattactcacgcataacaccgat
acggtcggtgtgatgtcctgcaatccagcgattggtggtatcggtaagagccatttggtg
aaagagatcgacgcccttgggggtgcaatggcgcgagcaaccgacttggccggtattcaa
ttccgtattttgaatagccgcaaaggccctgctgtacgtgctacacgcgctcaagccgac
cgtgctttgtatcgttctgcgatccgcaatattgttgaaaaccagcccaatctcgatatt
ttccaagccgcttgcgacgatctaatcgtgcaaggtgatggcgtgggcagcacggtttgc
ggtgtcgtcaccaataccaatatgcgcatccatgcgaccagcgtggtgttaaccgctggt
acgtttttgggcggacttatccacattggtatggaaaaccacagcggtggtcgcgccggt
gatccgccatcgaatgctctatctaagcgcttgcgcgaaatgccctttaacgttggccgc
ttaaaaaccggaacaccggcgcgtattgatcgtcgcagcgttgatttttcggtgatgcaa
gagcaagcgggcgatacaccactgccggtgatgtcgtttatgggctcggtctctcagcat
ccagaacaaattagctgttatgtcacccacaccaacgaacgcacgcacgagattatccgc
aataaccttgatcgttcgcctatgtatgccggtgtgattgaaggtattggcccgcgttat
tgcccgtcgattgaagataaagtcacgcgctttgccgataaaaccagccaccagattttt
gtcgagccagaaggtttaaacagcaacgagctgtacccgaacggcatctcaaccagcttg
ccgtttgatgtgcagttggatcttattcacagcatggtcggcttcgagaacgcgcacatc
acgcgtccgggttatgccatcgaatacgattattttgatccgcaagatttgaagcacagc
ctcgaaaccaagtttgtgaataacttgttctttgctggccagatcaacggtacgacaggc
tatgaagaagctggtgcgcaaggccttttggccggtgtgaatgccgctatgcgcgcgtta
gaaaaagacgcttgggtaccgcgccgcgatcaatcctatatcggtgtgttggtcgacgat
ctcatcactatgggcaccaaagagccgtaccgcatgttcaccagccgtgcggaataccgt
ttggtattgcgtgaagacaacgctgatttgcgcttaaccgaagtgggtcgtgatttaggt
ttagttgatgacgaacgctgggccgcattttcggctaagcgcgaagccattgagcaagaa
gtgacgcgtcttaaaacgacttgggtgcaaccgaataccccagaagccgcagcgctatta
gacatgggcgaagctgcgattaatcacgaatatagcttgcacgatttgctcaagcgcccg
ggtttggattacgccaaagtcgcgcagtttaaaggcgagccagtggctgacccacaagtg
gccgagcaggtcgaaattcaagccaagtacgatggttatattgcacgccagctagaagaa
atcgaacaatcgcgtcgctatgaaagtactaaattgccggttgatttggattacgatgcc
atcggtggcttatcgaacgaagtgaagcaaaaactgcgcaccttgcagccagaaacactg
ggcgttgcttcgcgtttgtccggtatcacccctgctgcgattagccagattttgattcat
ctgaaaaaacgcaatatggcgaccaagatgagtgcttaa
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