Theileria orientalis: TOT_010000011
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Entry
TOT_010000011 CDS
T03460
Name
(RefSeq) exosome complex exonuclease
KO
K03678
exosome complex component RRP45
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_010000011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_010000011
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TOT_010000011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20712985
NCBI-ProteinID:
XP_009688843
UniProt:
J7MBR6
LinkDB
All DBs
Position
1:complement(join(41990..42094,42124..42219,42250..42352,42383..42450,42482..42586,42616..42864,42898..43062))
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AA seq
296 aa
AA seq
DB search
MLREDNEIDFIQNISPDVSTLLIGQECLKKGLRIDGRSLDSHRHVSIEFNGSPGSVTISF
GNTVVFCCISQEIVEPNFERPNEGFLYFNVELSPFTSENYDPGKTSDSENNLIYFLENIF
KESSFLDLETLCVKSGKEVWALRVYVHVLQDDGNLLGACSFAALASLSQYRKPNLQESEE
FTYSSYMLWHKGVPLSIYNMPIMMTVSIMEGQDQYVLDANAFEEKILNTQISILYNQFGE
VFWTYKYGSTPVGLETFEGAVSVSKNKAIKLYSLLKHELEKNSEMLKSLLMCIQSQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttgagggaagataacgagattgattttatacagaacattagtccggacgtgtcgacg
ttgttaataggacaagagtgcctgaaaaaaggcctgagaatagatggaaggtcgctggat
tctcaccgccacgtgagtatagagttcaacggatcaccaggaagcgtaacaatatcgttc
ggaaatacagtagtgttttgctgcatatcgcaagaaatagtagagccgaattttgaaaga
ccaaacgaaggatttctctactttaatgtggaactctcaccattcacgtcggaaaactat
gatccaggaaaaacctcagactcggagaataacttaatatatttccttgaaaatatattt
aaggagtcgtcatttttggatctagaaacgctgtgcgtaaagagcggaaaggaggtgtgg
gcgttaagagtatatgtgcacgtgctacaagacgatggaaacctcctaggagcgtgctcg
ttcgcagcactggcatcactatcgcaatatcgcaaaccaaacctacaggaatcagaagag
ttcacatactcgtcctacatgttgtggcacaaaggagtaccactcagcatatacaatatg
ccaataatgatgacagtgtcaataatggaaggacaagaccaatacgttctcgacgcaaac
gcattcgaagaaaaaatattaaacacacaaatatcgatactatataaccaatttggagaa
gtgttttggacatataaatacgggtcgacgccagtgggattggaaacattcgaaggagca
gtctcggtctcaaaaaacaaagcaataaaactatactcgcttctgaaacatgaacttgaa
aaaaatagtgaaatgttgaagagtctactgatgtgtatccagtcacagtaa
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