Theileria orientalis: TOT_020000494
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Entry
TOT_020000494 CDS
T03460
Name
(RefSeq) conserved hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tot
Theileria orientalis
Pathway
tot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOT_020000494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tot03019
]
TOT_020000494
Messenger RNA biogenesis [BR:
tot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TOT_020000494
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TOT_020000494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
Motif
Other DBs
NCBI-GeneID:
20714637
NCBI-ProteinID:
XP_009690534
UniProt:
J4C862
LinkDB
All DBs
Position
2:complement(join(1024752..1027437,1027810..1032428))
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AA seq
2434 aa
AA seq
DB search
MSKFDSPSERTGLAQPSTFSSESCLGEYTQMRDRLKMLLSPKNSDDLYELLILLKNADLF
GRETVSKIDLLFTEIANCTPDDDLTHVELADCFVSTLLSYIDEEYFLELLQNIILHTKND
SLIMSCQNRLFELVFELGMGVVVDKLRNPLGLVYVLLKSSNFFNLKFMSSKVSQDETRVN
LGYVLCTQILSSMLASSSLYIFNFSSNFEQNDVYGYIVGLKLDNRNLKEFLNKEYFAKIC
QQIVYYCGPFENNVKFLENLLKICKFIHSKDISGSKSYRNLTVSILTQRYVNPLFQADLI
LTFLENMYTELISTDLKDYKTFSLNFKANFGFRHINPFNSSYNEETKEEAEEYKHEDDLG
SDYGEDKLLKSDLFFNLFPQVQEEDLVEVYWVLETDILYALFQSLISPEHEARFSPLFMS
LYEGAKNGTIFSRALIFKLSLIWSDYQNFGRGDYNPISLKLVTMNEDFWFLYEHGVSTLV
PRNLLLSEMRSYADDFKDKRCEHLYDFMLNIAIHTDSDCFFIVLLEVLRYSGYDFHVLKY
SLQMFQSTLLEFFKHNRVKLSRGVLEIVFFCRQYFDWGFMTMLIYSIDTMITGDSDKYAK
VALSDGLIDYLNWKLQMEADMTKRSLAENTDSDTIVVMDKNDMEDQNEEIEEYSAQEEPE
ETPVMFNLSANIVAEVFYILHHLLGPTEVVLELFFLYNQRMKGLSSYNILLLPLYKGIEH
KLKQAEKSTSLEAHLEHGVGDSLHMDHEGAFEDKERRGVVDFSDRTHFSLGPNKDIYGYL
LLNEDSELTTSHVVTLIFSGKMAKNVLNAIKLLNGEQGSRPQYILDLILRKFVNKLQQIF
LVRVPDEFCLHLTTGANCSPEDELLLRNLKLLALFVAGLVSLHINSVHIDSIYMVFRTLL
ECLKSDSVVLIEFAMMAFNNIKNLFNYPLFTKEFVSDAKVAKFYPNLLKTYKAILASPDY
ISEIETSLDQGIANEVISQDTLAEDKCLKGKITTKGLVIIKSGEEPGLDAALPTTAMQSS
TTLQSATTIKSPPSGDYDLLVGLCNNMDYNPPKMHPLFYHEQCLMTILNVGVDDFFNTLK
LQIEVPENSAETISAFATFSGSQFMATVESLVLAGNLDWLFFLILRHAITKGEASFEEIT
SLLQTLGAKALEFFVKFLSFSVNMLLKYLRSCRALLIYKKILLVCAALLGELTISRNKPL
LTKHLNVKMLLSFSYEKGMLSVTVPFVCRLMSYVAKSKIFKLPNPWTFCVLSLLNEIKSV
KNLKQVLVLEINNLILTLTSPSNQQQQMSPSHTSQQSAQMHSPVAMANGAPMSPTIDALT
SVMKSNIVGSNINTGVHVKELLRHRVLGEFDQSCRFSGNIWSNSNETKLKIPPIHNDIKI
LLRRKIIINTKLLTSGATVNGNGSNGGSTQGVGPTSSSVVNSVMNMDMYNLILNAIESCY
RESIFIIEKIVPICVSTCGIISKIDFTQETSIDTLKRCLTSMTTGLSTSLVNVICKEVLM
SILSSEIYLALLNHYSTMVASMGAGGSGMSNGSVSMGASSTSENYPIFDCIWLEYISQIL
ARDNLALVCALVEQLTLELMGRSLDEMISNWSNGVASLANANNISTILYNQFLSTLHSGS
QSSTSTYFSANSLRNTDELSQLYKKYLSLVPSTIARVERTEKRPGLRFPDFFIVPPIDNI
PTNLVISKFDEFEQRLKECAKYLLMYPPIVPMPHCKFLYKCESSSLLLLSFLHKNHQIFT
LLWSVHYVIVKAINVAECYELILSRVIKNIVDSKSVSIPSVVSEVELSLLEMLCVDNANL
LNITTSLLPNLTFNKLVLFLRFRLIKVSALDVYLCNSGDLEFVVKMVYRLIVESNYISLK
ELPLSLKFLSRFDKNSVVHSIGEPTKLSVVLTKLLQYSNSTSAAMNSSSSLSTPGGSSAA
QADRLVSLRLLFVSRLYIRNRCVLQSDVSKKHVNMYIDFLNCETDSEVDLFFINFNENPI
DQFITSALLITLFASYQTGAQPGLGGKGGLMGDREREVRRFDGIPSVTYGNPNFEYVPVF
CKLVNGFVQTDVFILQKVLHILLSVLYKNYCLPVFFKIIQSFIYNPNYTFPAHVSISQCL
LYCNPTEMTNFAPFWVQLATSKQLVQSLIQSPTEWPILSQLVRYVLIYYSSASSNSTQTP
QALTGSKDAKDGALDSLLDSILNILLYLLQICPEFICGYYLSLCEVTTSVRFRNIFTFST
PKNVKCSNPSTTTEVPETAPLSFVNHIQFIIQKPTLKALTDAYIAEPTDRLVGLILKELQ
PEGILIYYTLYLGYTLPLLISKVGGGSSATQQPMASQLSGNASMKVINCYLLLEKLVIHS
KSKLLVSSMLLHMRYPNLVTMRFVSIFKNLFERADNVQELIITCIMERLLVKPHPWGVVH
LVFQLVKFKKFWTFVQHNKPVEEHLKKIMQLYVT
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttgattcaccctcagaaaggactggcctcgcacagccaagtaccttctct
tccgaatcatgtttgggtgaatacacccagatgcgggacagattaaaaatgctcctctct
ccaaaaaattcagacgacctgtacgaactgctgatactgctgaaaaacgcggatttattt
ggaagggagaccgtgtcgaaaatagatttgttatttacagaaatcgcaaactgtacacca
gacgatgacctgacacacgtggagctggcagactgtttcgtgtcaacactgctgtcgtac
atagacgaggagtacttcctggagctgctccagaacatcatcctccacacgaaaaacgac
tcactcatcatgtcgtgccaaaacagactgttcgaactcgtgtttgaactgggaatggga
gtagtggtggataagctgagaaacccactgggcctggtctacgtgctgctcaaaagctca
aactttttcaacttaaaattcatgagctcgaaggtgtcacaggacgaaacgagagtaaac
ctgggctacgtgctgtgtacacaaatacttagctcaatgctggcgtcgtcgtcactgtac
atattcaacttcagcagcaactttgagcagaacgacgtgtacggatacatagtgggcctt
aagctggacaacaggaacctgaaggagtttctgaacaaggagtactttgcaaaaatatgc
caacagatagtgtattactgcggacctttcgaaaacaacgtcaagttcctggaaaacctg
ctaaaaatatgcaagttcatacactcgaaggacataagcggaagcaagagctacaggaac
ctgacagtgtcgatcctgacacaaagatacgtaaacccgctttttcaagcggacctaatc
ttaacatttttggaaaacatgtacacggagcttatatcgacggatttaaaggactataag
acgttctcactcaactttaaagcgaacttcgggttcagacacatcaacccgttcaactcg
agctacaacgaagaaacgaaggaggaagcggaggaatataagcatgaagacgatctggga
tcggactacggagaagataagctgctcaaatcggacctgttcttcaacctgttcccacaa
gtgcaggaggaggacctggtggaagtgtactgggtgctggaaacggacattttgtacgcg
ctcttccagtcgctgataagcccggagcacgaggcgcgattctcgccgctgttcatgagc
ctgtacgaaggggcgaagaacgggacgatcttctcgagagcgctgatctttaagctctcg
cttatctggtcagactaccagaacttcggaagaggagactacaacccgatctcgctgaag
ctggtgacgatgaacgaggacttctggttcctctacgaacacggagtgtcgacgctggtg
ccgaggaacctgctgctgtcggagatgaggtcgtacgcagacgacttcaaggacaagagg
tgcgagcacctgtacgacttcatgctgaacatcgcaatacacacggactcagattgcttc
ttcatcgtgctgctggaggtgctgcgctactcaggctacgacttccacgtgctcaagtac
tcgctgcagatgttccagtcgacgctgctggagttctttaagcacaacagagtaaagctg
agcagaggagtgctggagatcgtgtttttctgcaggcagtacttcgactggggcttcatg
acgatgctgatctactcgatcgacacgatgatcacaggagactcggacaagtacgcaaag
gtcgcgctctcagacggactgatagactacctgaactggaagctgcaaatggaggcggac
atgacgaagaggtcgctggcggagaacacggacagcgacacgatcgtggtgatggacaag
aatgacatggaggaccagaacgaagaaatcgaggagtacagcgcgcaggaggagccggag
gagacgccagtgatgtttaacctgtcggcgaacatagtggcggaggtgttctacatcctg
caccacctgctgggcccgacggaggtggtgctggagctattcttcctgtacaaccagaga
atgaaggggcttagcagctacaacatactgctgctgccgctttacaagggaatcgagcac
aagctgaagcaggcggaaaagtcgacgtcgctggaagcacacctggaacacggagtgggc
gactcgttgcacatggaccacgaaggagcattcgaggacaaagaaagaagaggagtcgtc
gacttcagcgacagaacgcacttctcgctgggaccgaacaaggacatctacgggtacctg
ctgctgaacgaggactcggagctgacgacgtcgcacgtggtgacgctgatcttctcaggg
aagatggccaaaaacgtgctcaacgcaattaagctgctgaacggagagcagggctcgagg
ccgcagtacatactggacctgatcctgaggaagttcgtgaacaagctgcagcagatcttc
ctggtgagagtgccggacgaattctgtctgcacctgacgaccggggcgaactgcagcccc
gaggacgagctgctgctgaggaacctgaagctgctggcgctattcgtggcgggcctggtg
agcctgcacatcaacagcgtgcacatcgactcgatctacatggtcttcaggacgctgctg
gagtgcctgaagtcggactcagtggtgctcatcgagttcgcaatgatggccttcaacaac
atcaagaacctgttcaactacccgctcttcacgaaggagttcgtctcggacgcgaaggtg
gcgaagttctacccgaacctgctgaagacgtacaaggcgatcctggcctcgccggactac
atctcggagatagagacgagtctggaccaggggatcgcgaacgaggtgatatcgcaagac
acgctcgcggaggacaagtgcctcaagggaaagatcaccacgaagggactggtgatcatc
aagagcggagaggagccggggctggacgcggcgctgccgacgaccgcaatgcagagcagc
acgacgctgcagtcggcgacgacaatcaagtcgccgccgagcggagactacgacctgctg
gtaggactctgcaacaacatggactacaacccgccgaaaatgcacccgctcttctaccac
gagcagtgcctgatgacgatcctgaacgtgggcgtcgacgacttcttcaacacgctgaag
ctgcagatcgaggtcccggaaaacagcgcggagacgatcagcgccttcgcaaccttctca
ggctcgcagttcatggcgacggtggagtcgctggtgctcgcagggaacctggactggctc
ttcttcctgatcctgagacacgcgatcacgaagggagaggcgagcttcgaggagatcacg
agcctgctgcagacgctgggcgcgaaggcgctggagttcttcgtcaagttcctgtccttc
tcagtgaacatgctgctgaagtacctgcgctcctgcagagcgctgctcatctacaagaag
atcctgctggtctgcgcggcgctgctgggggagctgacgatctcgaggaacaagccgctg
ctgacgaagcaccttaacgtgaagatgctgctctcattctcgtacgaaaaggggatgctc
tcagtgacggtgcccttcgtgtgcaggctcatgtcatacgtggcgaagagtaagatcttc
aagctcccgaacccgtggacattctgcgtgctctcgctgctcaacgagatcaagagcgtt
aagaacctgaagcaggtgctcgtgctcgagatcaacaacctgatcctgacgctgacgagc
ccgagtaaccagcagcagcagatgagcccctcgcacacgtcgcagcagagcgcgcagatg
cacagcccagtcgcaatggcgaacggagcgccgatgtcgccgacaatcgacgcgctgacg
agcgtgatgaagagcaacatcgtgggcagcaacatcaacacgggcgtgcacgtgaaggag
ctgctgcgccaccgcgtcctcggcgagttcgaccagagctgcaggttcagcggaaacatc
tggtcaaactcgaacgagacgaagctgaagataccgcccatccacaacgacatcaagatt
ctgctgcggaggaagatcatcattaacacgaagctgctgacgagcggagcgacggtgaac
gggaacggaagcaacggcgggagcacgcagggcgtgggcccgacgtcgagcagcgtggtc
aacagcgtcatgaacatggacatgtacaacctgatcctgaacgcaatcgagagctgctac
cgcgagagcatcttcatcatcgagaagattgtgccgatctgcgtctcgacctgcgggatc
atatcgaagatcgacttcacgcaggagacctcgatcgacacgctgaagcgctgcctgacc
tcgatgacgacggggctgagcacgagtctggtgaacgtgatctgcaaggaggtgctcatg
tcgatactctcctcggagatatacctggcgctgctgaaccactactcgacgatggtggcg
agcatgggcgcgggcggcagcggaatgagcaacgggagcgtgagcatgggagctagttcc
acgtcggaaaattacccgatcttcgactgcatatggctggagtacatctcgcagatactg
gcgagagataacctggcgctggtgtgcgcactggtggagcagctgacgctggaactgatg
ggaaggtcgctggacgaaatgatcagcaactggtcgaacggagtggcgagtctggcgaac
gcgaataacatatcgacgatactgtacaaccagttcctgagcacgctgcactcgggaagc
cagtcgagcacgtcgacgtacttctcagcgaacagcctgaggaacacagacgaactctcg
cagctctacaaaaagtacctctcgctggtgccctcgacgatcgcgagagtggagaggacg
gagaagaggccggggctgaggttcccagacttcttcatcgtgccgccaatcgataacatc
ccgacgaacctggttatctcgaagttcgacgagttcgagcagaggctgaaggagtgcgca
aagtacctgcttatgtacccgccgatcgtgccgatgccgcactgcaagttcctgtacaag
tgcgagtcgtcatcactgctgctgctgagcttcctgcacaaaaaccaccagatattcacg
ctgctctggagcgtgcactacgtcatcgtgaaggcgattaacgtggcggagtgctacgag
ctgatcctgagcagagtgataaagaacatcgtggactcgaagtcggtctcgatcccgtca
gtggttagtgaagtggagctgagtctgctggaaatgctctgcgtggacaacgcgaacctg
ctgaacatcacgacctcgctgctgccgaacctgaccttcaacaagctggtgctcttcctg
aggttcaggctgatcaaggtctcggcactcgacgtgtacctgtgcaactcgggagacctg
gagttcgtagttaagatggtatacaggctcatcgtggagtcgaactacatatcactgaag
gagctgccgctctcgctgaagttcctgagcaggttcgacaagaactcggtggtccactcg
atcggagagccgacgaagctgagcgtggtgctgacgaagctgctgcagtactcaaacagc
acctcggcggcgatgaacagcagcagctcgctgtctacgccgggcggctcgagcgcggcg
caggcggacaggttggtgagcctgcggctgctcttcgtgagcaggctctacatcaggaac
cgctgcgtcctgcagagcgacgtgagcaagaagcacgtgaacatgtacatcgacttcctt
aactgcgagacggactcggaggtggacctgttcttcatcaacttcaacgagaacccgatc
gaccagttcataacctcggcgctgctcatcacgctcttcgcgtcataccagacgggcgcg
cagccggggctgggcggcaagggaggcctgatgggcgaccgggagcgcgaggtgcggagg
ttcgacggcatcccgagcgtgacctacgggaacccgaacttcgagtacgtcccggtcttc
tgcaagctggtcaacggcttcgtgcagacggacgtgttcatcctgcagaaggtgctgcac
atcctgctctcagtgctctacaaaaactactgcctgccggtcttcttcaagatcatacag
agcttcatctacaacccgaactacacgttccccgcgcacgtctcgatctcgcagtgcctg
ctctactgcaacccgacggaaatgacgaacttcgcgcccttctgggtgcagctggcgaca
agcaagcagctggtgcagtcgctgatacagtcgccgacggagtggccgattctctcacag
ctggtgcgctacgtgctcatctactactcctcggcatcctcgaactcgacgcagacgccg
caggcgctgacgggctcgaaggacgcgaaggacggagcgctggactcgctgctggacagc
atccttaacatcctgctctacctgctgcagatatgcccggagttcatctgcggctactac
ctctcgctctgcgaagtgacgacgagcgtgcgcttcaggaacatcttcaccttcagcacg
ccgaagaacgtgaagtgctcgaacccgtcgacgaccacggaggtgccggagacggcgccg
ctctccttcgtgaaccacatccagttcatcatacagaagccgacgctgaaggcgctcacg
gacgcgtacatcgcggagccgacggacaggctggtgggcctgatcctgaaggagctgcag
cccgaggggatcctgatctactacacgctctacctgggctacacgctcccgctactcatc
agcaaggtgggcgggggcagcagcgcgacgcagcagccgatggcctcgcagctgtcgggc
aacgcctcgatgaaggtgatcaactgctacctgctgctggagaagctggtgatccactcg
aagtcgaagctgctggtgagctcgatgctcctgcacatgcgctacccgaacctggtgacg
atgcgcttcgtctccatcttcaagaacctcttcgagagggcggacaacgtgcaggagctc
atcatcacgtgcatcatggagcgcctgctggtgaagccgcacccctggggcgtggtacac
ctggtcttccagctggtcaagttcaagaagttctggacgttcgtgcagcacaacaagccg
gtggaggagcacctgaagaagataatgcagctgtacgtgacgtag
DBGET
integrated database retrieval system
