Theileria orientalis: TOT_040000636
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Entry
TOT_040000636 CDS
T03460
Name
(RefSeq) DEAD-box family helicase
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
tot
Theileria orientalis
Pathway
tot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TOT_040000636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tot03041
]
TOT_040000636
Enzymes [BR:
tot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOT_040000636
Spliceosome [BR:
tot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TOT_040000636
Complex C
U5 SnRNP specific factors
TOT_040000636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
20716687
NCBI-ProteinID:
XP_009692568
UniProt:
J4CE48
LinkDB
All DBs
Position
4:complement(join(1407901..1408085,1408118..1408378,1408434..1408749,1408789..1408993,1409028..1409147,1409178..1409294,1409536..1409624,1409656..1409835,1409876..1410015,1410047..1410440,1410473..1410598,1410637..1410834))
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AA seq
776 aa
AA seq
DB search
MEEKKSTSNVVRFGNTTSPEIIPESKLYPSKVASKGNESLLNDGTSRMLSVEQLISKKSE
ANGPLKVTYISKAQRNRNLEEARKREQLEALKNEENLKRRRRELSERSEREREMERRERQ
KIKEVERRNEEKERRNERDTKESEKDVKPVNSDLAVLNLLKLPEKEVRDKLIEKELEQIR
HHYLGMNRQKKKVQKPSEKFKTIFNFEWDDSEDTTKFDNNPIYQNRPEPQLLFGRGFRAG
FDVREQRKRNNFYDELSKRRAENPEWSESMSRQQLDATARKARDLQEAELANTHWTQKKR
SEMTDRDWRIFREDFDIYIKGGRVPPPIRTWAESPLPWELLESIKKAGYTKPTPIQMQAI
PIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKMLPPLDDETSMDGPYALVMAPSRELALQ
IYDETNKFSTYCTCRSVAVVGGRSAEAQAFELRKGCEIIIGTPGRIKDCLDRAYTVLSQC
NYVVLDEADRMIDMGFEDVVNEILDCIPTTNLKDDDESKALEQELSTKAGHRRYRITQMF
SATMPAAVEKLTKKYLRAPCFISIGDVGAGKSSITQKLEFVAESKKRQKLEEVLEHLEPP
IIVFVNLKKVTDVIAKNISKIGYRYHPIELLLIPTSTTISISKTYNTKQCSCRAVSLHGG
KNQESREDALNKFKSGQYDILVATDVAGRGLDVEGVKAVINYDMPKDIQSYTHRIGRTGR
AGLKGLSISFVTEADTALFYDLKQLLVSTDNAVPQELSQHPASKVKPTQADRNITN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaagtcaacttcgaatgttgtgagatttggaaatacaacatcgccagaa
ataattccagaaagtaaactgtatccatccaaagtcgcttcaaaaggcaacgaatctctt
ctcaatgacggaacctcccgaatgttatcagtcgaacaactcatttctaagaagtctgag
gccaacgggcctctgaaggtaacatatatttcgaaggcacagagaaataggaacctagag
gaggcaaggaaaagagagcaattggaggcactaaagaatgaggaaaacctaaaaagaagg
agaagagaactttcagagagatcggagcgagaaagggagatggaaagaagagagaggcag
aaaataaaagaagtagagcgtagaaatgaagaaaaggaacgaagaaatgaaagagacact
aaagagtcagaaaaggacgtgaagccagtaaacagtgacctcgcagttttaaacttgctt
aagttgccggaaaaggaagtcagagataagctgatagaaaaggagttggagcaaattagg
catcactacctgggaatgaacaggcaaaagaaaaaggtgcagaagccttcagaaaaattt
aaaacgatatttaacttcgagtgggatgactcggaagatacgacaaaatttgataataat
ccaatataccagaataggccggagccacaactgctattcggtagaggattcagagcaggg
ttcgacgttagagaacagaggaaaagaaacaacttctacgatgagctgtcgaaaagaaga
gcagagaacccagagtggtcagagtcgatgagtaggcagcagctggacgcaacggcaaga
aaagcaagagatttacaagaggctgaattggcaaacacgcattggactcagaagaaacgc
agtgaaatgacggatcgcgactggagaatattcagagaggactttgatatatatataaag
ggaggacgagtgccaccgccaattaggacgtgggcagagtctcccctgccatgggagctg
ttggaatcgattaaaaaggccgggtacacgaagccaacaccgattcagatgcaagcaatt
ccaatagccttggaaatgagagacttgataggaatagcagtaacagggtcaggaaaaacg
gcagcttttgtattgccaatgctaacctacgtgaagatgttgccgccactggatgatgag
acgtcgatggatgggccctacgcactagtgatggcgccatcgagggagttggcacttcaa
atatacgacgaaacgaacaaattctcaacgtactgcacctgtagatcagtggcggtggta
ggagggagaagcgcagaagcacaggcgtttgaactgaggaaaggatgtgaaattataatt
gggactcctggacgcataaaggactgtttggatagagcgtacacagtcctgtcgcagtgc
aattacgtggtgctggacgaagcggacagaatgatcgacatgggcttcgaagacgtggtc
aacgagatactggactgcataccgaccacgaacctgaaggacgacgacgagtcgaaggcg
ctggagcaggagctgagcacgaaggcgggccatagaagatacagaataacgcagatgttc
tcagcaacaatgccggcagcagtcgagaagctgacgaagaagtacctgagggcgccctgc
ttcatatccatcggagacgtgggagcgggcaagagctcaatcacgcagaagctggagttc
gtagcagagtcgaagaagaggcagaagttggaggaggtgctggagcacctggaaccgccg
ataatagtcttcgttaacctgaagaaggtgacggacgtgatcgcaaaaaatatatcaaag
ataggatacaggtaccaccctattgagttactgttgatacctactagtaccaccattagc
attagtaaaacgtacaacacaaaacaatgttcctgcagagcggtgtcgctgcacggcgga
aagaaccaggagtcgagagaagacgcgctcaacaagtttaagtcaggccaatacgacatc
ctggtggcgacggacgtggcgggccgcggactggacgtcgagggcgtgaaggcagtgatc
aactacgacatgccgaaggacattcagtcgtacactcacagaataggacgcactggacgc
gcgggactcaagggactgtcgatctcgttcgtcacggaggccgacacggccctcttctac
gacctgaagcagctgctggtctcaacggacaacgcagttccacaggaactcagccagcac
ccagcctcgaaggtaaagccgacgcaggcggacaggaacataactaactag
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