Tympanuchus pallidicinctus (lesser prairie-chicken): 128074960
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Entry
128074960 CDS
T08967
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128074960 (TRPC4)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128074960 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128074960
NCBI-ProteinID:
XP_052527300
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYATVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDVSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRQSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETQETKCKGIRCAEQNNAFSTLFETLQSLFWSIFGLINLYVTNVQPKHEFTEFVGATMF
GTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIP
SPKSLWYLIRWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNVQTPKMNKDAASLSETEEKN
ESEGNKKGKKKAFSLFDITTMIHPRSATIASEAHNVSNGSAMLVSESIKEKQKRVNFVTD
IKNFGLFHRRSKTNSAEQSTNKIYTVSEEVSRQQAEEQCEKNDELEEGELTMNCEVNTQS
PDEKCMVAELQNDSNTLDSQDEGSICALETEKTELQNSESATPQDQLDKESDISTNCDGK
QETIEQGDYVITRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgtattgtacgagcagaatctgaactgtcccattcagagaaagcctatctgaatgctgtg
gagaaaggagattatgctactgtaaagaaagcattggaagaagcagaaatttatttcaag
atcaatattaactgcattgatcccctgggaagaactgcgctccttattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaatgtatatgtgggagatgctctt
ttgcacgccataaggaaggaggtggttggtgctgtggaactgctgctaaaccacaagaag
cccagtggggagaaacaggtcccaccaatacttctggacaagcagttttcagaattcacg
ccagatatcacacccattattctagctgctcacaccaacaactatgaaatcatcaaactc
ctcgtgcagaagggggtctctgtgcccaggccacacgaggtccgctgtaactgcgttgag
tgcgtctcaagttcggatgtggacagccttcggcactctcgatctaggctcaatatctac
aaggctctggcgagcccatctttgattgctctgtccagtgaggatcctttccttactgct
tttcagctgagctgggagctgcaggaactgagtaaagttgaaaatgaatttaagtcagaa
tatgaggaactgtcgcggcagtgcaagcaatttgcaaaagatcttctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttaatagaagaa
caaagtggcaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgcccagcccaactgccagcagctgcttgcatcccgctggtatgacgagttccctggg
tggaggaggcgacactgggctgtgaagatgttgacatgcgttgtcataggactccttttc
ccagtcttctctgtgtgctacttgatagctcccaaaagccccttagggctgttcatcaga
aagccatttatcaagtttatctgccatactgcatcctacttgacttttctgttcctgttg
ttgcttgcatctcaacacattgacaggtcagacgtgagcatgcagggaccacctccaacc
atcgttgagtggatgatattaccgtgggtcctgggctttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgattggtggaacctcatggattttgta
atgaactccttgtacttggcaacaatctctttgaaaatcgttgcattttcaaagtatagc
gggttggttccacgacagagctgggacatgtggcatccaacactggtggctgaggcactg
tttgcaattgcaaacatctttagctccttacgcttgatctcgttattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgctgctggacattttgaaatttctc
ttcatatactgccttgtgttgctagcatttgcaaatggattgaaccagctgtacttctac
tacgagacacaagaaaccaagtgcaaagggatacgatgtgcagagcagaataatgcattt
tcaacattatttgaaacgctgcagtcattattctggtctatatttggactcatcaatcta
tatgtgaccaatgtgcaaccaaagcatgaatttactgaatttgttggggccaccatgttt
ggtacctataatgtaatctctctggttgttctactcaacatgctaatagccatgatgaat
aattcttaccagctgattgctgatcatgcagacatcgagtggaagtttgctcggacaaaa
ctctggatgagttactttgaagagggagggactctgcccactcctttcaatgtcattcca
agccctaagtccctctggtatctgattaggtggttatggagacacctgtgcaagaaaaaa
attagaagaaaacctgaaagttttggaacaatagggagacgtgcagctgacaatctgaga
agacatcatcaataccaggaggttatgagaaatctggttaagaggtacgttgcagcaatg
attagagatgccaaaactgaggaagggctgacagaagaaaattttaaggagttaaaacaa
gatatttccagcttccgttttgaagtcctgggtttgctaaaaggaagcaagctttctaat
gtgcagactccaaaaatgaacaaagatgctgcctctctgtcagaaactgaagaaaagaat
gagagtgaaggaaacaagaaaggaaagaaaaaggcattcagcctttttgatattacaaca
atgattcacccacgatcagccacaattgcctctgaagcacataacgtaagcaatggctca
gcaatgttggtgtcagagtccattaaggagaaacagaagcgtgtgaattttgtaacagac
ataaaaaattttgggttatttcacagacgatcaaaaacaaactctgcggaacagagtaca
aataaaatatacactgtttctgaagaagtttcccgtcaacaggcagaagaacaatgtgag
aaaaatgatgaactggaagagggagaactgactatgaactgcgaagtaaacacccaaagt
cctgatgaaaagtgcatggtagctgagttgcaaaatgacagcaacactttggattcacag
gatgaaggaagtatttgtgctttagaaacagagaaaacggagttacaaaactcagagtca
gccacaccacaggatcagctggacaaggaatcagacattagcactaactgtgatggaaaa
caggaaaccattgagcagggtgactatgtgataaccaggttgtga
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