Tympanuchus pallidicinctus (lesser prairie-chicken): 128077045
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Entry
128077045 CDS
T08967
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128077045
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128077045
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
128077045
NCBI-ProteinID:
XP_052531629
LinkDB
All DBs
Position
Unknown
AA seq
2017 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVITYFNSSL
GENGTFINTTMTIFNWDEYIEDKNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQAEGEKDEEEFRKSESEDSIKRKGFRFS
IEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHST
FEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPVNGKMHSTVDCNGVVSLVGGP
PALTSPTGQLLPEVMIDKATTASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSIA
SMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDG
FIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVA
RIQKGIDFVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAYL
KEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLNASSSSEGSTVDIGLPPEGEQPEVEPEESLEPEACFTEGCVRRFKCCQVSVED
GKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKV
FTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVN
TTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIM
YAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTM
MVETDDQSEDMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVG
MFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGE
PDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAE
PLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVS
GDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVS
AVVIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPMKEDMIMDKLNENSTPEKTDMTPS
TTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctcgtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgaacaacgtatcaatgaagaaaaagctaaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccaaagccaaacagcgacttggaggcaggaaag
accctgccatttatttatggcgatatacctccaggaatggtatctgagcccttggaagac
ctggacccatattacatcaataaaaaaaccttcatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctcctgactggacaaagaatgtagaatac
acatttactggaatttatacctttgaatcactcattaaaattcttgcaaggggcttctgc
ttagaagattttacatttcttcgagacccgtggaactggctagatttcactgtcattaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcggatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctacag
tggcctccagacaattctacttttgaaacaactgttattacctactttaatagctcttta
ggtgaaaatggtacatttattaatacaacaatgacaatatttaactgggatgaatacata
gaagataaaaatcatttctacttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactacgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggctctttctacctgattaatttgatc
ctggctgtggttgccatggcctacgaagaacaaaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcgagagattatagcggagtaggtggaata
ggtggattctctgaaagttcttctgaggcatccaaactgagctcgaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacaagctgaaggtgagaaggatgag
gaagaatttcggaaatccgaatcggaggacagcatcaaaagaaaaggcttccgattttcc
attgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttgctg
agcattcgtggctccttgttttccccaaggcgcaacagcagaacaagtcttttcagcttc
agaggtcgagcaaaggatgtaggatctgaaaatgactttgctgatgatgagcacagcact
tttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaacgg
cgcaacagtaacattagtcaggccagtaggtcatccaggacagtacctcctcttccagtg
aacgggaagatgcacagcactgtggattgtaatggagtagtttctttagtcggtgggcct
ccagctctgacgtcacctactggacagcttttgccagaggtgatgattgataaagcaacc
actgctagcaatggcactactacagaaactgacttaaggaaaagaaggtctagttcttac
catgttcctatggactacctaacagatcctagtgcaaggcagcgagcaatgagtatagcc
agcatgctcacaaacacaatggaagaacttgaggaatcaagacagaaatgcccaccatgc
tggtataaatttgctaacacttgcttgatttgggactgctgcactccctggctgaaagtc
aaacatattgtaaatttgattgtgatggacccctttgttgatctggccattactatctgc
attgttctaaacacactgttcatggccatggagcactatccaatgacagaacagtttagt
ggtgtcctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgtttctc
aagataattgccatggatccttactattatttccaagagggctggaatatttttgatggt
tttattgtgagtcttagtttaatggaacttggccttgcaaatgtagaaggattatctgtc
cttcgatcattccgattgcttcgagttttcaagttggcaaaatcctggccaactctaaat
atgctgattaagattattggcaactcagtgggagctctgggcaatttgaccctggtgctg
gccatcattgtgttcatttttgctgtggttgggatgcagctttttgggaaaagctacaag
gaatgtgtctgcaagatctctagcgactgtgaacttccacgctggcacatgcatgacttt
ttccactctttcttgattgtattccgagtgctgtgtggagaatggatagaaacgatgtgg
gactgcatggaggttgcaggccaaaccatgtgccttactgtcttcatgatggtcatggtg
attggaaacttagtggtactcaacctgtttcttgccttgctcctgagctcctttagttca
gacaaccttgcagctacagatgatgataatgagatgaacaatctccagattgctgtggca
agaattcagaagggtatagattttgtgaagagaaaagtgcgtgaattcatccaaaaagcc
tttgttagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaacaaa
aaagacagctgtatttccaaccacacgatagtagaaataggaaaaaaccttgcctacctt
aaagaagggaatggaactaccagtggcataggcagcagtgtggaaaaatatgttgttgat
gaaagtgattacatgtccttcataaacaacccaagtctcactgtgacagtaccaattgct
gttggggaatctgattttgaaaatttaaatacagaggagtttagcagcgagtcagacctg
gaagaaagcaaagagaaattaaatgcctccagttcatcagaaggtagcacagttgatatt
ggactacctccagaaggagagcagccagaagtagaacctgaagaatctctggagcctgag
gcttgttttacagaaggctgtgtgcgaagattcaagtgctgtcaagtcagtgtcgaagat
gggaaagggaaaatctggtggaatcttaggaaaacatgctataagattgttgaacacaac
tggtttgagaccttcattgtcttcatgattctcctcagcagtggtgcgctggcatttgaa
gatatatacatagaacaacgtaaaactatcaagaccatgctggaatatgctgacaaagtt
tttacttacatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaaacc
tatttcactaatgcatggtgctggctggacttcctgattgttgatgtctctttggttagc
ttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggacacta
agagctttgagacctctgagagccttgtcgcgatttgaagggatgagggtggttgtaaat
gccctcttgggagcaattccatccattatgaatgtgcttcttgtttgccttatattctgg
ctgatcttcagtatcatgggcgtaaatctatttgctggaaaattttactactgtgttaac
actacaactgatgagagatttgatatcagccaaatcaacaattacagccaatgtgaggag
ctcattaaaaacaatgaaactgccagatggaagaatgtgaaagttaactttgataatgta
ggccttggttatctttctttacttcaagtggctacattcaaaggatggatggatatcatg
tatgctgctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctatac
atgtatctttactttgtcatctttataatctttggatcattctttaccttgaaccttttc
attggtgtcatcatagacaatttcaaccaacagaaaaaaaagtttggaggtcaagatatt
tttatgacagaagaacagaagaaatactacaatgcaatgaaaaagttgggttcaaagaaa
ccacagaagcctataccacgaccagcaaacaaattccaaggcatggtctttgactttgta
acaaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcacaatg
atggtagaaacagatgaccagagtgaagacatggaaaacattttatattggattaacctt
gtgtttattgtacttttcactggagaatttgtcttgaaattgatttcacttcgccattac
tacttcaccatcggctggaatatttttgattttgtagttgtcattctttccatagtagga
atgtttttagctgagatgattgagaaatattttgtgtctcctactttgttccgagtcatc
cgacttgccagaataggtcgcatcctgcgtctcattaaaggcgcaaagggaatccgcact
ctgctttttgctctgatgatgtctcttcctgctttgttcaacattggcctgctgctcttc
ttggtcatgtttatctatgccatatttggcatgtccaactttgcctacgttaagagggaa
gttggaattgatgacatgttcaactttgaaacatttggcaacagcatgatctgcctattt
caaattaccacatctgctggctgggatggcttgttagccccaattcttaacagcggggag
ccggactgtgaccctcataaagatcacccagggagctctgttaaaggcgactgtggcaac
ccttcggttgggattttcttctttgtcagctacatcatcatatcctttctggtggtggtg
aacatgtacattgctgtcattctggagaacttcagtgttgcaactgaagaaagtgctgag
cccttgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgatccagat
gcaacacaattcatagagttcagtaaactatcagattttgcagcttcattagatcctcct
cttctcatagcaaaaccaaacaaggtccagctgattgcaatggatctgcccatggtaagc
ggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgtgttaggggaa
agtggggagatggatgccctcagaatacagatggaagaccgatttatggcagccaatcct
tccaaagtctcctatgaaccaatcacaaccacattaaaacggaaacaggaggaggtatct
gctgttgttattcaacgtgctttcaggcgtcaccttttaaggcagaaagtcaaaaaagtt
tcatgtatatttaatcaggataaaggtaaagatgaggatgatctgcccatgaaagaagat
atgattatggataaattaaatgagaactccactccagagaaaacagatatgaccccatcc
acaacctccccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaaaaa
gacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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