Tympanuchus pallidicinctus (lesser prairie-chicken): 128077060
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Entry
128077060 CDS
T08967
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128077060
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128077060
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
128077060
NCBI-ProteinID:
XP_052531664
LinkDB
All DBs
Position
Unknown
AA seq
2011 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNTDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPVRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINVISYFNSTM
DENGTLINTTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKRRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRTRDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASMSSRMVPALPANGKMHSAVDCNGVVSL
VGGPSTLTSPTGQLLPEGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YIKKKIQEFIQKAFIRKQKALEEIKALEELNNKKDSCISNHTAVEINKDMNYLKDGNGTT
SGVGTGSSVEKYVVDESDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIEPEEALEPEACFTEGCVKKFPCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDVSDVNNYTQCEELIKNNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVEDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSALIIQ
RAYRRYLLKLKVKKVSSIYNKNKNKEGDGLVIKETIIDKLNGNSTPEKTDESSSTTSPPS
YDSVTKPDKEKYEKDKAEKNYKGKDVRENKK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccgccaggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaaacgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catactgatgatgatgatgaaaatggtccaaaaccaaacactgacttggaggcaggaaag
acattgccatttatttatggtgacatacctccaggaatggtttctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaggcaatt
ttccgattcagtgccacatctgccttgtatattttaactccttttaatcccgtcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctcctgactggacaaagaatgtagaatac
actttcactggaatttatacctttgaatcactgataaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcattcta
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcctaaagactattgtaggagcc
ctaatccagtctgtgaagaagctctcggatgttatgatcctgactgtattttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgtctgcag
tggcctccagacaattctacttttgaaataaatgttatttcctactttaatagcacaatg
gatgaaaatggtacacttattaatacaactgtgagcacatttaactggaaggattacatt
gaggatgaaactcatttctacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcagtgtccagagggatatatatgtgtgaaagctggtagaaatccc
aactatggttacacaagttttgacactttcagttgggcttttctgtcactctttcggcta
atgactcaggacttctgggaaaacctgtatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctgggctcgttctacctgatcaacttgatc
ctggctgtggttgccatggcctatgaggagcagaaccaagcaactatggaagaagcagag
cagaaagaggcagaatttcagcagatgctggaacagctaaagaagcagcaagaagaagca
caggctacggcagcagtggcagcagcatcagttgcatcaagggatttcagtggggtaggg
ggattaggagaactcttggaaagttcttcagaagcatcaaagttgagctcaaagagcgct
aaagaaagaagaaacagaaggaagagaagaagacaaaaagaaatgtctgaagcagaggac
aagggagatattgacaagtttcctaagtctgagtcagaagatagcatcagaagaaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggttcacatctccccat
cagtctttgctaagcatccgtggttccctgttctcaccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtcgcacaagggatataggatctgaaaatgactttgctgatgat
gagcacagcactcttgaggacaacgaaagcagaagagactctctctttgttcccaatcga
catggagaaaggcgtaacagtaatatcagtcaggccagtatgtcatccagaatggtgcca
gcccttccagccaatgggaagatgcacagcgctgtagattgcaatggagtagtctcctta
gttggaggaccttcaactctaacttctcctactggacagcttctaccagagggcaccact
actgaaacagaaataagaaaaagaagactgagttcttatcagatttccatggaaatgctg
gaagattctgctgcaagacaaagagcaatgagtatagccagcatacttacaaacacaatg
gaagagcttgaagaatccagacagaaatgtcccccatgctggtacagatttgcaaatact
ttcttaatctgggattgctggagtccatggttaaaagtaaaacatgttgtcaatttagta
gtgatggatccatttgttgatcttgctataactatttgcattgttttgaacaccttgttt
atggccatggaacattacccaatgacagaacaatttagcagtgtcctttctgtgggaaac
ctggtattcactggaatattcacagcagaaatggtactaaagataattgctatggaccct
tattattatttccaagaaggctggaatatttttgatggtatcatcgttagccttagttta
atggagcttggtctcgcaaatgttgaaggattatcagttcttcggtcattcagattgctt
cgtgtttttaaactggcaaaatcctggccaactctaaatatgctgattaagattattggc
aactcagtgggagctctgggcaatttgaccctggtgctggccatcattgtgttcattttt
gctgtggttgggatgcagctttttgggaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgcttccacgctggcacatgcatgactttttccactctttcttgattgta
ttccgagtgctgtgtggagaatggatagaaacaatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgataggaaacctagtggttctg
aacctgtttctggccttgctgctgagctcgtttagctcagacaaccttgctgctacagat
gatgataatgaaatgaacaatctccagattgctgtggcaagaattcagaagggaatagat
tatattaaaaaaaagatacaggaattcatacagaaagccttcattagaaaacagaaagct
ttagaagaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgctgttgaaataaataaagatatgaattatcttaaagatgggaatggaactacc
agtggtgtaggcacaggcagcagtgtggaaaaatatgttgttgatgaaagtgattatatg
tccttcataaacaacccaggcctcaccgtgacagtaccaattgctgttggagaatctgac
tttgagaatttaaacacagaagaatttagcagtgaatctgatatggaggaaagcaaacag
aaactaaatgcatccagttcatctgaaggcagcacagttgatattgcccctcctggagag
ggagagcaagcagaaattgaacctgaagaagctcttgaaccagaagcctgttttacagaa
ggttgtgtgaagaaatttccatgttgccaagtaagtatagaggatggcaaaggaaaaatc
tggtggaatcttagaaaaacctgctacagcatagttgagcacaactggtttgagactttc
attgtcttcatgattctcctcagcagtggagcactagcttttgaagatatatatattgaa
cagcgtaaaactatcaagaccatgctggaatatgctgataaagttttcacatacattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggactttctgattgttgatgtctcattggttagtttaatagccaatgct
ttgggctattctgaacttggtgccattaaatcgcttcggacattaagagctttaagacct
ttaagagccttgtcacggtttgaaggaatgagggtggttgtaaatgcccttgtaggagca
attccatctatcatgaatgtattgctggtttgtctgatattctggctcatcttcagcatc
atgggagtaaatctgtttgctggaaaattctatcactgtgtcaacaccacaacaggcgag
atgtttgatgtcagtgatgtcaacaattatactcagtgtgaagaactcataaaaaacaat
caaagtgcccgctggaaaaatgtgaaagtaaactttgataatgtaggagctgggtatctt
gctctgcttcaagtagctactttcaagggatggatggacattatgtatgctgcagttgat
tcaagagatgtagaagatcaacctaagtatgaggacaatctgtacatgtatctttatttt
gtcatctttatcatatttggatcattctttacattgaaccttttcattggtgtcattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaaaaaatattacaatgcaatgaaaaaactgggatccaaaaaaccacagaaacctata
ccaaggccagtgaacaaattccaaggcatggtctttgattttgtcaccaaacaagtattt
gacatcagcatcatgatacttatctgccttaatatggtcacgatgatggtagaaacagat
gaccagagtaaggaaatggaaacaattttgtcccggattaaccttgtgttcattatcctt
ttcactggagaatttgtcctcaaattgatttcacttcgccattactatttcactataggc
tggaatatttttgatttcgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgaaaagtattttgtgtcccctactttgttccgagtcatccgacttgccagaata
ggtcgcatcctgcgtctcattaaaggcgcaaagggaatccgcactctgctttttgctctg
atgatgtctcttcctgctttgttcaacattggcctgctgctcttcttggtcatgtttatc
tatgccatatttggcatgtccaactttgcctacgttaagagggaagttggaattgatgac
atgttcaactttgaaacatttggcaacagcatgatctgcctatttcaaattaccacatct
gctggctgggatggcttgttagccccaattcttaacagcggggagccggactgtgaccct
cataaagatcacccagggagctctgttaaaggcgactgtggcaacccttcggttgggatt
ttcttctttgtcagctacatcatcatatcctttctggtggtggtgaacatgtacattgct
gtcattctggagaacttcagtgttgcaactgaagaaagtgctgagcccttgagcgaggat
gactttgagatgttctatgaagtctgggagaagtttgatccagatgcaacacaattcata
gaatacagtaaactatcagattttgcagcttcgttagatcctcctcttctcatagcaaaa
ccaaacaaggtccagctgattgcaatggatctgcccatggtaagcggtgacagaattcac
tgcctcgacatcttgtttgctttcacaaagcgtgtgttaggggaaagtggggagatggat
gccctcagaatacagatggaagaccgatttatggcagccaatccttccaaagtctcctat
gaaccaatcacaactacattaaaaaggaaacaggaggaggtatctgctctcattattcag
cgtgcttataggcgttaccttctaaagctgaaggttaaaaaagtatccagtatatataac
aaaaataaaaacaaagaaggagatggacttgttataaaagagacaattattgataaacta
aatgggaactccactccagagaaaacagatgagagttcctctacaacttctccaccatcg
tatgacagtgtaacaaagccagataaagaaaaatacgagaaagacaaagcagaaaagaac
tacaaaggtaaagatgtcagggaaaataaaaagtga
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