Tympanuchus pallidicinctus (lesser prairie-chicken): 128081068
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Entry
128081068 CDS
T08967
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128081068 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128081068 (SS18L1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128081068 (SS18L1)
GBAF(ncBAF) complex
128081068 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
128081068
NCBI-ProteinID:
XP_052539931
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMTQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVPMQQSGQNTMPTTSLSMSVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccgagaggcaaaggggaggtgacccagcaaact
atccagaagatgttagatgaaaatcaccacctaatacagtgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaaccttgtttac
ttggcaacaatagcagattctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaacataaacttgggcccaggaggaatgactcagagtgcatccaaccagtctcttcat
tcacagagcaatctcagtgatgcaatcgggacgggccttcctccttcctccctcatgcag
agtcagattagcaatggtccaaaccacgtgcctatgcagcagtcaggccagaacacaatg
cccacaacctctctgagtatgagtgtcagcagtcacggaactgggcctggttatagccat
acagtgcctgcatctcagaatgtgccaatgcaaggccagggctcgataggcaattacgtc
tctcgaacaaacatcaacatgcagtctaacccagtctccatgatgcaccagcaagcagca
acgtcacattacaactcggcacaaggagggagccagcattaccaggggcagtcctccatt
gccatgatgagccagagcaaccagggcaacagcatgatgggtcagcgaccgatgggcccc
tacagagcttcccagcaaggttcctcacagcagtacatgggtcaggaggaatactacagt
gagcagtacagtcatggacaaggctcatcagaacctatgaatcagcaatattatccagat
ggacatggtgactatgcctatcagcagtcatcctacactgagcagagctatgacaggtca
tttgatgactccacacaacactattatgaaggaggaaactctcagtacagccagcagcag
gcaggataccaacaaggagctgcacaacagcaaacatattcccagcagcaatacccgaat
caacaaagttacccaggacaacagcaaggatatggtcctgcacaaggagcatcttcacag
tattccagctaccaacagggacaggggcagcaatatgggagttacagagcttctcagaca
ggaccatccgctcagcagcagaggccttatggctacgagcagggacaatatggaaattac
cagcaataa
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