Thrips palmi (melon thrips): 117646991
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Entry
117646991 CDS
T08251
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117646991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117646991
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117646991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
117646991
NCBI-ProteinID:
XP_034244347
UniProt:
A0A6P8ZAU0
LinkDB
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Position
Unknown
AA seq
1255 aa
AA seq
DB search
MSKLQLRSKRKTDSPTNLKVQAKSDVPLTKKAKTAAKVDVSDSESSSDEFVRPSKDLKVN
AGILLSRNGPSPVPDFSSIEKSIFSGVSKLSDSDSDDSDFEEVPAPSRSLNESAKDDSGI
LSNDSEQNSKVKTAVQESVKEKVPSKPVRSSRRKPATKDKDEAPKSKTEKQPVKKPADVA
EPLSDAKGKGKGSRAVKRKNEEVENTSVSPGKQIKHKDEPEKKSSTRSSRSRPSTSTTKV
EEEEKKPKGNGLAKKGKVCGKGEKVTSELKEGKTSNKVVVKEEDPANVDNLDIAQLLALG
EGLKFEAKSEHSDSDSDEWEEVDPNEVKKHEIPKEGVQITLDMPEFSWRRKKQKDHQACL
QAEMNRAFNRVRKELQLLCHKTSLLLWVAHGIFLNRTINSENVLGMALSLVPPDLCDLPK
SPGSKYINKLLQWFATRFECSEGFPEDIVGGKTRALTAVLEQNFTRKYAKSTKEMTFMFV
AVLRAVGIEARLVISFQPMPLKPQSDELLSINSKKRGRATKKETKEDSEAEDDPAPVVSS
PYFEKKGKASVSKETGKAKAKGNSGNGNEKLSKSGGAPKPSSSAVKGSESNVKGRKQSGK
SDPATAKSPPKVRELRRKSSKKSYSEKTDSDNEDSDDEEKELPILSPGRKKDDKTLSERL
KAAAAKRTPTNRRFSLQSTASKARKSTKDSDSDFEPEPKRDSGVGSSRSSTSPKKKTSSR
RSQSENSESDSDSDFEKKPKASQSSKKATKKTPPKGRQSKGRPSKSKGNGNKVLSSDDDS
GKKKPTCSGFDYWIEVYLKDDDRWTCVDVPSKKVDSTKNILAKATQPVCYVIAFNVDGTL
KDVTKRYSPKFSQVTAKQRVSADWWSKSLKPFAPKHSAREAAEDSEMNLVELDRPMPKTV
AECKNHPLYVLTRHLLKFEAIYPPDSPSLGFVRSEPIYARQNVYTLRSRETWMKEAKVVR
LGEKPYKVVKQPKWDRLAHKMITDRPLEVFGPWQVEDYVPPPAVDGKVPRNAYGNVELFK
PTMLPKGTVHLQVPSLSRVAKKLQIDCAPAVVGFDYHSGGCHPTFDGFVVCEEFVDVLMD
AWNKDIDESAKRREEKHEKRIYGNWRRLIKGLLIREALKARYDFNGEAGAQDLDQAGSSQ
PSGSKASVNPEALQAARIVREDAPVTCLFPKLMANIRAQKTRQKRSAPNEKKKPPKGKNV
KQSQSQKGKGRKKRKDETSEEEESDWDSTTTEEDDVNMVLLSDEDSGSEFEDLKR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacttcagcttaggagtaagaggaaaacagactcccccacaaatttgaaggtt
caagctaagtctgacgttcctctgacgaagaaagctaaaactgccgcaaaggtggatgta
tcagattcggaaagcagctccgatgaatttgtacgtccatccaaagatctgaaagtcaat
gcaggcattctactatcaagaaatggtccctcacctgtcccagacttttcatctattgag
aaaagcatcttttctggtgtgtctaagctgagtgactctgattctgatgattcagacttc
gaagaagttccggcaccttctcgctctctaaatgagtccgccaaggatgacagcggcatc
ttgtctaatgacagtgagcaaaatagcaaagtgaagacagctgtgcaagaatctgtcaaa
gagaaagtgccttctaaaccagtgagaagctctaggaggaagcctgctacaaaggataaa
gatgaagctccaaaatcaaagacagaaaaacaacccgttaaaaaacctgcagatgttgct
gagcccctttctgatgctaaaggcaagggaaaagggtcaagagctgtcaaacgtaagaat
gaggaggtggaaaacacatcagtgtcacctggcaagcagataaagcataaggacgagcca
gagaaaaagagctctacaagaagttcaagatctcgaccatctaccagcacaacaaaagtg
gaggaagaagaaaaaaagcccaaaggaaatggtcttgcaaagaaaggcaaagtttgtgga
aagggtgagaaagtaaccagtgagctgaaagaaggcaaaacttcaaacaaagttgtcgtc
aaggaggaagatccagcaaatgtcgacaatttggatattgctcagctgcttgctcttgga
gaaggtttgaaatttgaagccaaatcagagcactccgactctgatagtgatgagtgggag
gaggtagatcccaacgaagtaaaaaagcatgaaattccaaaggaaggggttcaaatcact
cttgacatgcctgagttcagttggcgccgcaagaaacaaaaagaccatcaagcgtgttta
caagctgaaatgaacagggcctttaatcgagtacgaaaggagttgcaactgttatgtcac
aaaaccagccttctcttgtgggtcgctcatggtatcttcctcaacaggacaatcaatagt
gaaaatgtcttgggaatggcactgtctctggtacccccagacctctgtgaccttccaaaa
tcacctggaagcaagtatattaacaagctcttgcagtggtttgccacacgttttgagtgt
tcggaagggtttccagaagatattgttggtggtaaaactcgtgcccttactgcagttctg
gaacaaaattttactcgaaaatatgctaaatcaaccaaggaaatgacatttatgtttgtt
gctgtgctacgtgcagtgggcatagaggctagactggtaatttcattccagcccatgcct
ttgaaacctcaaagtgatgagcttttaagcataaacagcaagaaaagagggcgggctact
aagaaagagaccaaggaggacagtgaagctgaagatgacccagcacctgttgtgagcagc
ccctactttgagaaaaaagggaaagcttctgtttccaaagagactggaaaagccaaagcc
aagggcaattcaggaaacgggaacgaaaagttgtcaaagtcgggaggagcaccaaagccc
tcttcctctgctgtgaaaggaagtgagagcaatgtcaaagggaggaagcaaagtggcaag
tctgatcctgcaacagcaaagtcccctcccaaggtccgagagcttaggagaaaaagttca
aaaaagtcttactctgagaaaactgattcagacaatgaagattctgatgatgaagaaaag
gagctccccatcctaagccctggcagaaagaaagatgataagactttgtctgaacgtttg
aaggcagctgctgctaagaggacacctacaaacagaaggtttagtctacaatctactgca
tcaaaggctcgtaaaagtacaaaggactctgacagtgattttgagccagaacctaagcga
gactctggcgtaggcagtagcaggtcgtctacatctcccaagaagaagacatcatctcgt
cggtcacaatctgaaaactcagaaagtgacagtgacagtgattttgagaaaaagccaaag
gcaagtcaaagttcaaaaaaagcaactaaaaagacaccacctaaaggtcgacaatcaaag
ggccgcccttcaaagtctaaaggaaatggaaacaaagttttgtcctcagatgatgattca
ggtaaaaagaagcccacctgttctggatttgattattggattgaagtctatttgaaggat
gatgatagatggacctgtgttgatgttccatcaaagaaggttgactcaacaaaaaatatt
ctggctaaagccactcaacctgtgtgctatgtaattgcctttaatgtagatggcaccttg
aaagatgtgactaaaaggtattcaccaaagttttctcaagtgactgcaaagcaaagagta
tctgcggactggtggagtaaaagcttgaagccttttgctcctaaacactcagccagagag
gctgcagaagacagtgaaatgaacttggtggagctagacagacccatgccgaaaactgtt
gctgagtgcaaaaatcatcctctgtacgtgttgacccgacatctcctgaaatttgaagct
atataccccccagactccccgagtcttggctttgttcgcagtgagcctatatatgccaga
cagaatgtttatacacttcgctctcgtgaaacctggatgaaagaagctaaggtggttcgc
cttggtgagaagccatacaaagttgtgaaacaaccaaaatgggataggctcgctcataag
atgatcactgataggcctcttgaagtatttggaccctggcaagtggaggactacgttcct
ccacctgctgttgatgggaaagtaccccgaaatgcttatggaaatgtggaacttttcaag
ccaaccatgctgcctaaaggaactgtacatttacaagttccatctctcagtagagttgca
aagaagttacagattgactgtgcaccggctgttgttggctttgattaccacagtggaggc
tgccaccctacttttgatgggtttgtggtttgtgaagagttcgttgatgtgctgatggat
gcctggaacaaggatattgatgagtctgccaaacgacgtgaagagaagcacgagaaaaga
atctatgggaattggagaaggctcatcaaaggcttgctcattcgtgaggcgctcaaggct
cgatatgacttcaatggggaggctggggcccaggacctagaccaggctgggagcagtcag
cccagtggcagcaaggcaagtgttaatcctgaggcactgcaggccgcacgcatcgttcgc
gaggatgccccagttacctgccttttccccaagttgatggcaaacattagagctcagaaa
acccgccaaaagaggtcagcgcctaacgagaagaaaaagccacccaaaggcaagaacgta
aagcaaagtcagagccagaaaggaaaagggaggaagaagcgcaaggatgagactagcgag
gaagaagagagtgattgggactcgaccactacagaggaagatgatgttaacatggttctg
ctgtctgatgaagacagtggaagtgagtttgaagatttaaagcgttaa
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