Thrips palmi (melon thrips): 117653305
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Entry
117653305 CDS
T08251
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04120
Ubiquitin mediated proteolysis
tpal04137
Mitophagy - animal
tpal04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117653305
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117653305
04137 Mitophagy - animal
117653305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117653305
Ubiquitin system [BR:
tpal04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117653305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117653305
NCBI-ProteinID:
XP_034254799
UniProt:
A0A6P9ABM3
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MESSLFAASASQDFVESLPNMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttctttgtttgctgcgtctgcgtcacaggacttcgttgagtcacttccaaac
atgcagatctttgtgaagaccctgactgggaagaccatcacccttgaggtcgagccctct
gactccattgagaacgtgaaggccaagatccaggacaaggaaggcatccccccagaccag
cagcgtctcatcttcgctggcaagcagctcgaagacggacgcaccctgtccgactacaac
attcagaaagaatctacccttcacctggttctccgtctgcgtggtggcatgcagatcttc
gtgaagaccctgactggaaagacaatcactcttgaggtcgagccctctgattctattgag
aatgtgaaggccaagatccaggacaaggaaggcatccccccagaccagcagcgtctcatc
ttcgccggcaagcagcttgaggatggccgcactctttctgactacaacatccagaaagaa
tctacactccaccttgttctgcgtctgcgtggtggcatgcagatcttcgtgaagacccta
accggaaagactatcacgctggaagtcgagccttcggattctattgagaatgtaaaggcc
aagatccaggacaaggaaggcattcccccagaccagcagcgtctcatcttcgccggcaag
cagctggaggatggccgcactctttctgactacaacatccagaaagaatctacactccac
cttgttctgcgtctgcgtggtggcatgcagatcttcgtgaagaccctaaccggaaagacc
atcacactggaagtcgagccttcggattccattgagaatgtaaaggccaagatccaggac
aaggaaggcattcccccagaccagcagcgtctcatctttgctggcaagcagctggaggat
ggccgtactctttctgactacaacattcagaaggaatctactctccatcttgtcctgcgt
cttcgtggtggcatgcagatctttgtgaagaccctgactggaaagacaatcactcttgag
gtcgagccctctgattctattgagaatgtgaaggccaagatccaggacaaggaaggcatc
cccccagaccagcagcgtcttatctttgctggcaagcaacttgaagatggacgcactctt
tctgattacaatattcagaaggaatcaacccttcacttggtactccgtctgcgtggtggt
atgcagatctttgtcaagactctgacaggcaaaaccattacactcgaagttgagccctct
gactcaattgaaaatgttaaggccaagattcaggataaggaaggcatccccccagaccag
cagcgtctcatcttcgccggcaagcagctggaggatggccgaactctttctgactacaac
atccagaaggaatctactctccatcttgtcctgcgtctgcgtggtggtatgcagatcttt
gtcaagactcttactggcaagaccatcacccttgaagttgagccttcggattccattgag
aatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagcgtctcatc
ttcgctggcaagcagcttgaggatggccgtactctttctgactacaacatccagaaagaa
tctactctccaccttgtcctgcgtctgcgtggtggcatgcagattttcgtgaagacttta
acgggcaagaccatcaccctggaagttgagccttcagattcaattgaaaatgtcaaggct
aagatccaagacaaggaaggtatccccccagaccagcagcgtcttatcttcgctggcaaa
caacttgaagatggtcgcaccctttcggattacaacattcagaaggagtcgacccttcac
ttggtcctacgtctgcgtggtggtatgcagatcttcgtcaagaccttaacaggcaagacc
atcacccttgaagttgagccctctgattctattgagaatgtgaaggccaagatccaggac
aaggaaggcatccccccagaccagcagcgtctcatctttgccggcaagcagcttgaagat
ggccgcactctgtctgactacaacattcagaaggagtccaccctccatctggtcttgcgt
ctgcgtggtggccagtaa
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