Thermofilum pendens: Tpen_0647
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Entry
Tpen_0647 CDS
T00446
Name
(GenBank) translation elongation factor 1A (EF-1A/EF-Tu)
KO
K03231
elongation factor 1-alpha
Organism
tpe
Thermofilum pendens
Pathway
tpe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tpen_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpe03019
]
Tpen_0647
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0647
03012 Translation factors [BR:
tpe03012
]
Tpen_0647
04131 Membrane trafficking [BR:
tpe04131
]
Tpen_0647
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpe04147
]
Tpen_0647
Messenger RNA biogenesis [BR:
tpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Tpen_0647
Transfer RNA biogenesis [BR:
tpe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Tpen_0647
Translation factors [BR:
tpe03012
]
Eukaryotic type
Elongation factors
Tpen_0647
Membrane trafficking [BR:
tpe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Tpen_0647
Exosome [BR:
tpe04147
]
Exosomal proteins
Proteins found in most exosomes
Tpen_0647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
EF-G_D2
RsgA_GTPase
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-ProteinID:
ABL78049
UniProt:
A1RXW9
LinkDB
All DBs
Position
598356..599657
Genome browser
AA seq
433 aa
AA seq
DB search
MSEKKPHLNLVVIGHIDHGKSTLMGRLLYEIGAVDPRLIQQYEEEAKKMGRETWKYAWVL
DKLKEEREKGITIDLGFYKFETKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKE
GEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMDTVNYSKERYEEIKNQLIRLLRMVG
YKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDV
YSIKGVGTVPVGRVETGVLKVGDKIIINPPKAVGEVKSIETHHTPLQEAIPGDNIGFNVK
GVEKSQLRRGDVAGHTTNPPTVAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEE
LLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIA
AGVVIDVKKAEGY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaaagccacacttaaacctggtagtgataggacacatcgaccacggaaaa
agcaccctaatgggaagactcctctacgagataggcgcggtagaccccaggctgattcag
cagtacgaggaggaagcgaaaaagatgggtagggagacgtggaagtacgcttgggttcta
gacaagctcaaggaggagagagagaagggtatcacaatcgacctcggcttctacaagttc
gagactaagaagtacttcttcacgctgattgacgcgccgggtcacagggacttcgttaag
aacatgataaccggagctagccaggctgacgtcgcattgctcgtcgtatctgctaaggag
ggtgaattcgaggctggcataagccctgctggtcagaccagggagcacgtcttcctggcg
aagacgatgggcgtagaccagctggtcgtggctataaacaagatggacacggttaactac
agcaaggagaggtacgaggaaattaagaaccagctgataaggttgctccgaatggtcggc
tacaaggtggacgagataccgttcataccgacttcggcgtgggaaggcgtgaacgtgtcc
aagaggacccccgagaagactccgtggtacgacgggccatgcctctacgaggcgttcgac
ttcttcaaggagcctccgaggcccatagacaagccgctaaggatacccatacaggacgtc
tacagcattaaaggagtaggcacagttcccgttgggagagtcgagacaggcgtactcaaa
gttggagacaagataatcatcaacccgccgaaagcagtgggagaagtcaaatccatagag
acccaccacacgccgctccaggaggctataccaggggacaacataggtttcaacgtgaag
ggcgttgaaaaatctcagttgcggcgtggcgacgtggcaggacatacaacgaacccgccg
actgttgcggaagaattcacaggtaggatcttcgtcctgtaccacccgacggccatcgcg
gcaggctacacaccggtgctgcacatacacacggcgaccgtcccggtaacgtttgaggag
ctacttcagaagcttgacccaaggacgggtagcgttgcagaggagaagccgcagtacatt
aagcagggtgactccgccatcgtaaggttcaaaccgaggaagccggtcgtcgtggagaag
tactctgagttcccaccactaggcaggttcgccattagagactctggccgcaccattgct
gccggagtagtaatcgacgtgaagaaagccgaaggctattaa
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