Tetrapisispora phaffii: TPHA_0A00530
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Entry
TPHA_0A00530 CDS
T02235
Symbol
TPHA0A00530
Name
(RefSeq) hypothetical protein
KO
K12596
poly(A) RNA polymerase
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0A00530 (TPHA0A00530)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0A00530 (TPHA0A00530)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
TPHA_0A00530 (TPHA0A00530)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
11532487
NCBI-ProteinID:
XP_003683572
UniProt:
G8BML0
LinkDB
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Position
1:88935..90971
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AA seq
678 aa
AA seq
DB search
MGSTHSHNSRSAKKHKSKSKSHREKKIRRSSSHRIENTFKVLDNDHEELYDSYTDLIDLS
EDNDGEEHNKNMFLVLANRNSDNAANGNEKKITNNPKLIDEETEFKVSGNLEDNHDFIAF
SASSEDEQATKNSTHSSEMSDELDQTSMLNEQSSNEYYPWLLNHDHSKQKAVTDWLTQEI
KDFTSYISPSREEIKLRNRIIAAIKQAVRDLWSDADLLVFGSYATDLYLPGSDIDCVINS
EKGDKESRYNLYILASHLRQLNLATQVEVIAKARVPIIKFVEPKSQIHIDVSFERTNGVE
AAKLIREWLDDTPGLRELVLVIKQFLATRRLNNVHTGGLGGFSIICLVFCFLKMHPKIIT
NAINELDNLGVLLIEFFELYGKNFAYDDVAISVTDGRASYLPKTDFKQLNPSRTSFSLAI
QDPNDAMNNISRGSFNIAGIKKAFSSSFELLTRKCFDMDDATFKDRVGESILGNVIKYKG
EQRDFKDERSLIQNHAIIENEHYHAKRNRIVCDNDFLDLTSDSEVDIISEEEMYKLNQKV
KKKKLMKSKNKEKGVNPAKLIAKKSSSLKNKVLSTVTKTKVHSRKSVSSLMGINDSENES
EPITENTKKITTNENSSDHTDNRDNDDDFDSDVKKPHKSKEHLISEKSTIKKTTVDAQTR
RNFWLSKGQSMSTTVIGN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtactcattcacataactcgcgttctgcgaagaaacacaaatctaaatccaaa
tcccatcgtgagaaaaaaattagaaggtcatcttctcataggatagaaaatacatttaag
gtacttgataatgatcatgaagagttgtatgatagttatacagatttaattgacctatcc
gaggataatgatggcgaggaacacaataaaaatatgttcttggtactagctaatagaaat
agtgataacgcagcaaatggaaatgaaaaaaaaattacgaataatccaaaattgatagat
gaagagactgagtttaaggtttccggtaatttggaagacaatcacgattttattgcattc
tctgcaagctctgaagacgaacaagctactaaaaatagtacgcattcaagtgagatgtca
gatgaattagatcaaacaagcatgcttaatgagcagtcatcaaatgagtattacccttgg
ttacttaatcacgatcactcaaaacaaaaagcggtcacagactggctaactcaagaaatc
aaagattttacttcatacatttcaccaagccgtgaagaaattaaactacgtaaccgcatt
atagctgctataaaacaagcggttagggatctttggtcagatgcagacttactcgtgttt
ggatcatatgctactgatttgtatctaccaggttctgatatcgattgtgtgattaacagt
gaaaaaggagataaggaaagtagatataatctttacatattagcatcacacttaagacaa
cttaatttagcgacacaagttgaagttatagctaaagctcgtgtacccatcattaaattt
gttgaacctaaatcgcaaattcatatcgatgtatcttttgagaggaccaatggtgttgaa
gcagcaaagttaatacgagagtggctcgatgatacacctggtttaagagaactagttctt
gttataaaacaattcttagccactagaagattaaacaatgtgcatactggtggtctaggt
gggttttcaattatttgcctggtcttttgttttttaaaaatgcatcctaaaataataacg
aatgcaataaatgaattagataacctgggtgttttgctaattgagtttttcgaattatat
ggtaaaaattttgcttacgatgatgtcgcaatcagtgttactgatggacgtgcttcatac
ttacctaaaacagatttcaaacaattaaatccttccagaacatcattctcattagctatc
caagatccaaatgatgccatgaacaatattagcagaggatcatttaacatagccgggata
aaaaaagctttttccagttcttttgaattacttacaagaaaatgttttgatatggatgat
gctacttttaaagatagagttggagaaagtattttgggtaacgttataaagtataaaggt
gaacagagagattttaaagatgaaagatcattaattcaaaaccatgccatcattgaaaat
gagcattatcatgcgaagcgtaacagaatagtctgcgacaatgatttcctagatctaact
agcgatagtgaagtggatataataagtgaagaagaaatgtataaactgaatcagaaggtc
aaaaaaaagaagcttatgaaaagtaaaaataaagaaaagggagtaaacccagcaaagtta
attgcaaagaaatcgtcaagtctcaaaaataaagttctctctacggtaacaaagacgaaa
gtccattctaggaaatcagtttcaagtctgatgggaataaatgattcagagaacgaaagt
gaaccaatcactgaaaacacaaaaaaaataactaccaatgagaactcgtcagatcataca
gataacagggataacgatgatgattttgactccgacgttaaaaagccacataaatctaag
gaacatctaatatctgagaaatcaacaattaagaaaacaaccgttgatgcccaaaccaga
cgaaatttttggttgagtaaaggccagtcaatgtctactacggttataggaaattga
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