Tetrapisispora phaffii: TPHA_0G00240
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Entry
TPHA_0G00240 CDS
T02235
Symbol
TPHA0G00240
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0G00240 (TPHA0G00240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0G00240 (TPHA0G00240)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
TPHA_0G00240 (TPHA0G00240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_1
TPR_16
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_17
ANAPC3
RPN7
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
11533530
NCBI-ProteinID:
XP_003686296
UniProt:
G8BVD4
LinkDB
All DBs
Position
7:complement(37417..41709)
Genome browser
AA seq
1430 aa
AA seq
DB search
MDNKSENLNATKLKQLLKEAKSEVARGDYEEAIDICKQTLKLDKHNYFAYVFLGKSYSCL
DSGDISKNIENAISAYREAIDSIPSNLLAWKGLFKLFEERQTMIFPHIIPLEMYFTLCDQ
YSDLLQEQQQSLVELIHNIRMLRKAVPDIEYMFLQTMRPGVPLAEKIGRHLIKPQDCLKE
LLSLTLTTEQSEVSKIVSRERLKLSANDPDYQIKINQLAWEVYKNSKCDEYFNQLVNITD
NDEERNELEIKWLDHRITVLHSMPADTKHTLYGIIKTMVEDLVLVDTSSVRAWKLYFEWQ
DYQDLNSLDSKLVLRFFKKFPNEPLAVILYSWLFSFFSKYDTTSFNITDSNDKKVNESRS
NDKELADNDFNREELTNEEDIEELKEMLEQDEDSPILLESDILTSLIEYIPKAQTSALAH
RIVSQYYILSREYEAALPYIKTGTSLVANSIKSLGATLPNSKLAFTLNLATVYTYFDFKR
NYKTALALYEKILTVEPHNASAKLGKGLIFIEMENWKEANNLLLDVRKEFSENMEIVSAL
GWTYTNLHQYDEAIDILNTALKNMKGTDILSIELHTMTLWRLAKTYLSIQEAKEIENTSK
DLSLVNLAYQLLIKSLKLLETFSLSFSTLGHIYTEYYNDEQRAFGCYYKAFELNSGDIIA
AEYIIRKYTNAENWSAAHAIAEALVQSDGAKKYLKSLSWPYRVVGISHLERQQEAESIEW
FQSALRIDKEDIESWVGLGQAYVGCGRIEASIKVFEKAIELDSNHLYAKLFLAESLSNIG
EYEDSILLLKELTLSSLDQEVFHATYASTLTNYATDLYNRGFLTKSIKVSVEAIDSIYHL
FVDLQTHPQIAWISLFSSLQLFISVQSKIEELPIETLVSIFETVKNLQIEELDAIDKINL
ESILSSTDDDNITIACKFLVLSSKCAFTSGTNSETSATVKSSLWHNIGVSELVSLLMLRL
PESRDAAIFSFKKAIEYQSNSTKSWIALGISTMDINWRVSQHCFIKSIALSPKDTEVWFN
LSLLALKAKDLDFARQVLARTQSIAPQESSPWLGMALLLEKEGNTQESINMFSHAYILAN
GRSKVAQLLYAKNTLQNQIGYSKTENNLDSLEELSTAAYALEQYLKKSPNDAYALQSSLL
VLERLHQYLYADKLASRLSEILEKRFEKTQDEKELYNFAIIKSQISRIQLGLGNYETSID
NANLSQGIIQEYDSSLALSCQISNNICLGLAYYFLDDYDKTLEHFQILTKLSEDSKYLVI
LVSKVLYDIGSEESKMIALDELTEYIAINGNELLVTLTIAAISLLENHVDILETILQDLQ
NISLSEKIKDTHLSLQFLILNLVKKLERTSSSSELPLFQQTAFFFPNNDRSWKNLSEKIS
LRVASEGQNKLTAEQLSEKYSEMSNLRNIQRSLFLTPWSAKSLKSLNECF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggataataaatcagagaatttgaatgctacgaagctgaagcagcttttgaaagaggca
aaatcagaggtagctagaggtgattacgaggaggctattgatatctgtaaacaaactttg
aaattggataagcacaattactttgcctatgtattcttagggaagtcatattcttgttta
gattccggtgatatttctaagaacatagaaaatgcaatttctgcttatagggaagctatt
gattctattccttcaaatttactagcatggaaagggttattcaagctttttgaggagaga
caaaccatgatcttcccacatataataccattggaaatgtattttactttatgtgatcaa
tattctgatctattacaagaacaacaacaatcactagtcgagttaattcataatatacgt
atgcttaggaaggcagttccagatattgaatatatgtttttgcaaactatgagaccgggt
gtaccacttgctgagaagattggtagacatttgattaaaccacaagattgtttaaaagag
ttattgtcactgactttaactacagaacaaagtgaagtttcaaaaattgtcagtagggag
agattaaagttgagcgcaaatgatccagactatcagattaaaatcaatcagttagcatgg
gaagtgtataagaattctaaatgtgatgagtatttcaatcaattggttaatattactgat
aatgatgaagaaagaaacgaacttgagataaaatggctagatcatagaattacagttcta
cactctatgcctgctgataccaaacacacgttatatgggataattaaaacaatggtagaa
gatttggttttagttgacacctcttctgttagagcatggaagttatattttgaatggcaa
gattaccaagatttgaattccttagattcaaaattagtgttacgtttcttcaaaaagttt
cctaatgaaccattggcagtcatactgtattcctggttattttcatttttttcgaaatat
gacacaacctcgttcaatataaccgatagtaatgataaaaaggttaatgaatccagatca
aacgataaagaacttgcagacaatgattttaatcgtgaagaacttactaatgaagaagat
attgaagaactgaaggaaatgcttgaacaagatgaggattccccaattttacttgaatca
gatatattgacctctcttatcgaatatataccaaaggctcaaacttctgctttggctcac
agaattgtttcacaatattatatactttccagagagtacgaggctgcattaccatacata
aaaacaggtacttcattagttgctaattccatcaaatctctaggtgcaacacttccaaat
tcaaagttagcctttactttaaatttagccacagtttatacatattttgattttaaaaga
aactacaaaacagcattagctttatatgaaaagattttgacagtcgaaccacataatgca
agcgcaaagttaggtaaaggtttaatattcatagaaatggagaattggaaagaagcaaac
aatctgttgcttgatgttagaaaagaattctcagaaaatatggagattgtaagtgcttta
ggatggacatacacaaacttacaccaatatgatgaagctattgatatcttgaacactgct
ttaaaaaatatgaaaggcactgatattttatcgattgaattacatacaatgactctttgg
agactagcaaaaacctatctatctatacaggaggcaaaagagatcgagaacacttcaaaa
gacttatctctagtcaatttggcctatcaactactaattaaatctttgaagcttctggaa
accttttcattatcattttctacacttgggcatatttatacagaatattataatgatgaa
cagagagcgtttggatgctactataaagcattcgaattaaattccggtgatataattgca
gcagaatatattataaggaaatatacaaacgcagaaaattggtctgctgctcatgccatt
gcagaagctctagtacaatctgatggtgctaaaaagtatctcaagtccttatcttggcct
tacagggtagtcggtatttcccatctggaaaggcaacaagaagcagaatcaattgaatgg
tttcaatcagctttacgtattgataaagaagatattgaatcgtgggtgggattaggacaa
gcctacgtaggatgtggtaggattgaggcttctattaaggtttttgaaaaggcaattgaa
ctagattcaaatcatttgtatgctaagctctttttagccgagtccctatcaaacatagga
gagtacgaggacagtattcttttactaaaggaactaactttgtcttcacttgatcaagag
gttttccatgcaacttatgcttcaactttaaccaattacgctactgatttatataacaga
ggttttttaacaaaatcgataaaagtttcagtagaggccattgattcaatttatcacctg
tttgttgatttacaaactcacccacaaattgcttggatttcactttttagctctcttcag
ttatttatatctgtacaatctaagatcgaggagcttcctattgagacgttagtttcaata
tttgaaactgtcaaaaatttgcaaatagaagagctagatgctattgacaaaattaacctt
gaaagtatcctttcatcaacagacgatgacaatatcacaatagcctgcaaatttttagtt
ctatcatcaaagtgtgcttttacaagtggcacaaactcagaaacttctgcaactgtcaaa
tcatctctatggcataatattggtgtatctgaacttgtatccttactaatgttaaggtta
cctgaaagtagggacgctgccatattttcttttaagaaagcaatagaatatcaatcaaat
tcaactaaatcatggattgctttaggtatcagtaccatggacataaattggagagtatcc
caacattgctttataaaatctattgccttatcaccaaaagatactgaggtttggtttaat
ttatccttattggctttgaaggctaaggatctcgattttgcccgtcaagtgctcgctaga
acgcaaagtattgcaccacaggagtcatcaccttggttaggtatggcattattactagaa
aaagagggaaacacgcaagaaagtattaatatgttctctcatgcatatattttagcaaat
ggtagatcgaaggttgctcaattattatatgctaagaacacgctgcaaaaccaaattggg
tattcaaaaactgaaaataatcttgattctttagaagaactatcaactgcagcgtatgca
ttagaacagtatttgaaaaaatcaccaaacgatgcgtatgcattacaaagttcgctttta
gttttagaaagattgcaccaatatctatatgccgataaactggccagtagattatctgaa
atattagaaaaaagatttgaaaaaactcaagatgaaaaagaactgtataattttgccata
attaagtcacagatttctagaattcaacttggattaggcaattacgaaacttcgatagac
aatgctaatttatcgcaaggaattattcaagagtatgacagcagtctggcactctcatgt
caaatatctaataatatttgtttaggtttagcctattatttccttgatgattatgataag
actttagaacatttccagatattaacaaaattgtctgaggattctaaatacttggtgata
ctagtatctaaggtattatatgacataggatccgaggaatccaaaatgattgctttggat
gaattgacggaatacatagccatcaatggtaatgaattacttgtcaccttaactatcgct
gctatttccttactagaaaatcatgttgatatattggaaacaatattacaagatttacaa
aatatatcattgtcagagaaaataaaggatacacatttatctcttcaatttttaatatta
aatttagtcaagaagttggaacgaacttcctcatccagcgagttaccattatttcaacaa
acagcatttttctttccaaataatgatcgttcatggaagaatttgtctgaaaagatatct
ttgagagtagcttccgaaggacaaaataagttaactgcagaacaattaagtgagaagtac
tctgaaatgtcaaatttaaggaatattcaaagatctttgttcttgactccttggagtgcg
aagtctctgaaatcattaaatgaatgtttttaa
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