Treponema phagedenis: FUT81_11075
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Entry
FUT81_11075 CDS
T06342
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tphg
Treponema phagedenis
Pathway
tphg02020
Two-component system
tphg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FUT81_11075 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FUT81_11075 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tphg03021
]
FUT81_11075 (rpoN)
Transcription machinery [BR:
tphg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FUT81_11075 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_Tnp_Tc3_2
HTH_23
HTH_3
E1_4HB
FokI_D3
Motif
Other DBs
NCBI-ProteinID:
QEK09922
LinkDB
All DBs
Position
2463656..2465140
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AA seq
494 aa
AA seq
DB search
MKQRQRLVQQQRLALNQQLVQGFSLIKLSSNDLREEVLKQVESNPALTIVSDPLRKEGET
AAAESIRKLQNQPSVLRYTSEAEGKLASDNFQNFLENRAEEQRETIRDVLNEQLLYQKKD
PDILTTARILVQDLDLQGFFILPPERFIQSAPEELKSVLQKNLTAAISLLQKLEPQGCAV
FNFKESLAVQAELRFSGFSDPLYDYTIRLLKNHSELLFSSEKDLQRKLTPSVLSKRINEA
KIFPRPIDAEDAEDILSLIQELHPYPGRSVLEEQPPESDSFFAPDVIVKKTDTGFTAEIN
NQTIPVIAIREDYAKNLSGAQNKNKSAAKEQLRDAQTLIDLLAYRDQTLLKITEALLNFQ
QDFFRYGPAKHSPLRMLDVAEAVGIHVSTVSRAVNNKYLQYEHKNYPLRYFFSSRLMSVA
EAKSGIKKTYTSSQYSKESVKHRIKKIVEQWRKNNPNKKISDQTVSDILKQEGIQCARRT
VNKYRTELRTEPAF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacggcagcgtttagttcagcagcagcgccttgcattaaatcagcagctggtt
caaggcttttctttaattaaattatcctcaaacgatttacgggaggaggtgcttaaacag
gtagaaagcaaccccgccctgacaatcgtttccgaccctttacgaaaagaaggcgaaaca
gccgctgccgaatcaatcagaaaactgcaaaaccaaccttccgttttgcggtatacaagc
gaagcggaaggaaaacttgcaagcgataattttcaaaactttttggaaaaccgtgcggaa
gaacaacgggaaactattcgagacgtgcttaacgaacagcttttgtatcaaaaaaaagat
cccgatatccttacaaccgcacgcattcttgtacaggatttagacttgcaagggtttttt
atcctcccgcccgaaagatttattcaatccgctccggaagaattgaaaagtgttttacaa
aaaaacctgactgccgcaatatctttgctgcaaaaactggaaccgcagggctgcgcggtt
ttcaattttaaagaatcccttgcggtgcaggcggagctgcgcttttcaggcttttccgat
ccgctctatgactacaccattaggcttttaaaaaatcacagcgagctgcttttctcttca
gaaaaagatttacaacgcaagcttactccgagcgtactttcaaaacgaataaatgaagca
aagatttttccccgtccgatagacgcagaagatgcggaagatattttatcgcttattcaa
gaacttcacccgtaccctggacgcagtgtgctggaagaacagccgcccgagtccgacagt
ttttttgcacccgatgtcattgtcaaaaaaacggacaccggcttcacggcggaaattaac
aaccaaacaattcccgttattgcaatacgggaagactacgcaaaaaatcttagcggtgcg
caaaacaaaaataagtccgccgcaaaagaacaactgcgggacgcacaaacgctgatcgat
ttacttgcataccgggatcaaaccttattaaaaattaccgaagcactactgaacttccaa
caggattttttccgatacggccccgcaaaacacagccctttgcgaatgctcgatgttgcc
gaagcagtcggcatacatgtctccaccgtatcgcgggcggtaaataacaagtatctgcaa
tatgaacataaaaactatccgctgcgatactttttttcaagcagactcatgtcggtagcg
gaagcaaaatcgggcataaaaaaaacatacacttcatctcaatattcaaaagagtcggta
aaacatcgcattaaaaaaattgtggagcaatggcgaaaaaacaacccaaataaaaaaata
tccgaccaaactgtttcggacatacttaagcaagaaggcatccaatgcgcccgccgcacc
gtcaacaaatatcgaacagagctgcgcaccgaacccgctttctaa
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