Treponema pallidum subsp. pallidum Mexico A: TPAMA_0328
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Entry
TPAMA_0328 CDS
T02273
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TPAMA_0328 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpo03400
]
TPAMA_0328 (mutS)
DNA repair and recombination proteins [BR:
tpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TPAMA_0328 (mutS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
DUF1484
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFU66338
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Position
348654..351356
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AA seq
900 aa
AA seq
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MRSLASDTPLMRQYHAIRAQHPDAVLFFRLGDFYEMFDSDALHVSTLLGLTLTKRNGTPM
CGVPVHTARTHIARLLKHGKKVALCEQVSHPVPGELTQRKVIEIISPGTAVEDDFLSQGF
SQYLATVCASDATVAFSYLEVSTGAFFITSFPRAEAADALQKEFGRVQPSEVLLSASVLR
SLPELAAILSLYPRLVRTTGADALFNPEHTKNRLHHCFRTRNLDCLTLLPHSPDLAAAGA
LIAYLEETTRHPLSHVSAITRYHIHDFVEIDDATRKNLEILQNLHDSTHAHSLFETLNYT
HTAMGTRLLRYWLHHPLRSQEEIQKRLSAVVFFHHRPHILKTLRATLSCVRDVERLVARV
ALEKAHGRDLLALKESLRAILTFRSLERESPFPPDLLPSEGDTPVLQELYGLLEQSIKED
CPVTLSDGNLIKRGFSASLDELHRVRDNANEILKQYLAEERERTGIGTLKMKYNRMLGHF
LEVSKGHLSAVPAHFIRRRSLSNADRFTTEQLSELEAKLARAREGLVSFEQELFADIRRT
VCSHTQLLRTNAARVAQLDVLQSFAHAALQHGWSQPVFIKDGALRITGGRHPVVELHLPS
GEFVPNDLTLSSSEHAVLPRFALITGPNMAGKSTFLRQTALICLIAQVGSFVPAEKAELT
PVDRIFCRVGAADNLARGESTFLVEMSETAHILRAATRDSLVIMDEVGRGTATEDGLSIA
QAVSEYLLHHVRAKTLFATHYHELSRLAHPQLEHLKLDVLETDNTIVFLKKVTPGSCGSS
YGIYVARLAGLPESVLARACELLKQLQQRAGSAPRASAAHEADAVAQTEAVHAHKAASKP
CAQRVSADLFTQEELIGAEIASLNPDAITPLEALTLIARWKRSLRGSATQQSSAMTKRKG
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccctcgcgtcagatacccctctcatgcgtcagtaccacgccattcgggcacag
catccggatgcggtcctgttctttcgcttgggcgatttctacgaaatgttcgattccgac
gcgctccacgtgagtaccctcttggggctcacccttacaaaacgaaatggaacacccatg
tgcggggtgcccgtccataccgcgcgcacgcacatagcacgcctgcttaagcacggtaaa
aaagttgccttgtgcgagcaggtttctcatcctgtccccggagaactcacacagcgcaag
gtaattgagattatctcccccgggaccgcagtggaagatgactttctcagtcagggattt
tcccaatacttagccaccgtctgtgcctcagacgccaccgtcgccttttcttacctagaa
gtcagcaccggcgccttcttcatcaccagctttccccgcgccgaagcagcggacgcattg
caaaaagagttcggacgtgtccagccgtctgaggttctcctgtctgcttcagtgctccgt
tcactgcctgaacttgccgctatcctcagtctctacccccggctcgttcgtaccaccggc
gcagatgcgctttttaatcccgagcacactaaaaaccgcctgcaccattgctttcgcaca
cgcaacttggattgcctcaccctcctgccccattcgccagacctcgctgccgccggggcg
ctgattgcgtatttggaagaaaccacgcgacacccgctctcccacgtcagtgccatcacc
cgctaccatatccatgactttgtagaaatcgatgacgctacgcgcaaaaatctagagata
cttcaaaatctccacgacagcacccatgcgcattctctttttgaaacactcaactataca
cacaccgccatgggtaccaggctcctgcgctattggctgcaccaccccttgcgctcccag
gaggaaattcaaaaacgcctcagtgcagtggtcttttttcatcaccgtccccacatcctc
aagacactgcgtgcaacactctcgtgtgttcgggatgtggagcgcctagtcgcccgcgtg
gcgttagaaaaggcgcacggacgtgacttgctcgccttaaaagaaagtctcagggcaatc
cttaccttccgcagcctcgagcgcgaaagtccctttcccccagaccttcttccctcagaa
ggggataccccggtgctgcaggaactgtatggtcttttagaacagtctatcaaagaagat
tgccccgtaacgctaagcgatgggaaccttatcaagcgtggtttttctgcgtccttagat
gaactgcaccgcgtgcgtgacaatgcaaatgaaattctaaaacaatatttggcagaggag
cgtgagcgcacgggtatcggtacattaaaaatgaagtacaatcgcatgctcggtcacttt
ctggaggtatccaaagggcatctttctgctgtccctgcgcactttattcgtcgccgttca
ctgagcaatgccgatcgctttaccaccgaacagttgtcagaattggaagcaaaacttgcc
cgcgcccgtgagggcctcgtttcctttgaacaagaactctttgcagatatccgccgtacc
gtatgttctcatacccagctgctgcgcacgaacgctgcacgggtggcacagctggatgtg
ctccaatcttttgcgcacgctgcgctccagcatggctggagtcaaccggtctttatcaaa
gacggtgcacttcgtattacggggggcagacatccggtggtggaacttcatctcccctcc
ggggagtttgtacccaatgatctgacactttcttcaagtgaacatgcggtgttgccgcgc
tttgcgctcatcaccggaccgaatatggcaggaaaaagtacttttttgcgtcagactgcg
ctcatttgcctgattgcgcaggttggctcctttgtccctgcagaaaaggcagagctcacc
cccgtcgatcgtattttttgtcgggtaggagcggccgataaccttgcgcgcggggaatct
accttcttggtagaaatgagtgaaacagcacacatcctgcgtgcagcaacccgcgacagc
cttgttatcatggacgaagtaggacggggaacggcaactgaagacggtttatccatagcg
caggcagtcagtgaatatttgttgcatcatgtgcgtgcaaaaacgctgtttgcaacacat
taccatgaactgtcccgtcttgcccacccgcagttagaacacctcaagcttgatgttcta
gaaactgacaataccattgtatttctgaaaaaagtgacgcccggttcttgcggcagttcg
tacggcatttacgttgcgcgtctggcggggctccctgaatcggtactggcacgcgcgtgt
gagcttttgaaacaactgcagcagcgggcaggatctgctccacgtgcgtctgctgcgcac
gaagcagatgcagtggctcaaacagaagcagtacacgcgcacaaggcagcgtctaaaccg
tgcgcgcagcgtgtgtcggcagatctatttactcaagaagagttaataggcgcagagatt
gcatcgttgaatccagacgccattacaccgcttgaagcgctgacactcatcgcgcggtgg
aaacgcagcctccgcggttctgcaacgcagcagagcagcgccatgacaaaacggaagggg
taa
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