Tsukamurella paurometabola: Tpau_1878
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Entry
Tpau_1878 CDS
T01228
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tpau_1878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpr03021
]
Tpau_1878
Transcription machinery [BR:
tpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tpau_1878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
ADG78491
UniProt:
D5UMZ4
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All DBs
Position
complement(1965002..1966453)
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AA seq
483 aa
AA seq
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MAATQTSSSAQSADGADGSATSAETPAKKTTAKKAPAKKAAAKKAPAKAAAKKAPAKAAA
KKAPAKKAPAKRTAKKAAGKKDASAANPEDGAIEEEDVELDGDPDPTELSDEDVTIDSDD
TADDVSDSKAKSAVTKPAPADAEDDEPSEQDKASGDFVWDEEESEALRQARKDAELTASA
DSVRAYLKQIGKVALLNAEEEVELAKRIEAGLFAEQMINRWVERGEKPAIGIRRDMNWIA
RDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFST
YATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDI
TPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLD
TLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRD
YLD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacgcagaccagctccagcgcgcagtcggcagacggcgcggacggttcggcc
acctcggcggagacccccgccaagaagaccaccgccaagaaggcaccagcgaagaaggcg
gcggccaagaaggctcccgccaaggccgcggcgaagaaggctcccgccaaggccgcggcg
aagaaggctcccgctaagaaggctccggccaagcgcacggcgaagaaggccgcgggcaag
aaggacgcctcggcggcgaaccccgaggacggcgcgatcgaggaggaggacgtcgagctc
gacggcgatcccgatcccaccgagctctccgacgaggacgtcacgatcgactccgacgac
accgcggacgatgtctcggattcgaaggccaagagcgccgtcaccaagcccgcccccgcg
gacgccgaggacgacgagccctccgaacaggacaaggcctcgggcgatttcgtctgggac
gaggaggagtcggaggcgttgcggcaggcccgcaaggacgccgagctgaccgcctcggcc
gactctgtgcgcgcgtacctcaagcagatcggtaaggtcgcgctgctcaacgccgaggag
gaggtcgagctcgccaagcggatcgaggccggcctgttcgccgagcagatgatcaaccgc
tgggtcgagcgcggcgagaagccggcgatcggcatccggcgcgatatgaactggatcgcc
cgcgacggcaaccgggccaagaaccacctgctcgaggccaacctccggctcgtggtctcg
ctggccaagcgctacaccggccgcggcatggccttcctggacctgatccaggagggcaac
ctgggcctgatccgcgcggtggagaagttcgactacaccaagggctacaagttctcgacg
tacgccacctggtggatccggcaggcgatcacccgcgcgatggccgaccaggcccgcacc
atccgcatcccggtgcacatggttgaggtcatcaacaagctcggccgcatccagcgcgag
ttgctccaggacctgggccgcgagcccacgccggaggaactggccaaggagatggacatc
acgcccgagaaggtgctggagatccagcagtacgcgcgtgagccgatctcgctggatcag
acgatcggcgacgagggtgacagccagctcggcgacttcatcgaggactccgaggccgtg
gtggccgtcgatgcggtgtcgttcaccctgctgcaggaccagctccagtccgttctcgac
acgctgtccgagcgcgaggccggtgtcgtccgcctgcggttcggtctcaccgacggtcag
ccgcgcacgctggacgagatcggccaggtctacggcgtgacgcgcgagcggatccgccag
atcgagtcgaagacgatgagcaagctgcggcatccgtcacgctcgcaggtcctgcgcgac
tacctggactag
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