Trifolium pratense (red clover): 123882000
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Entry
123882000 CDS
T08949
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123882000
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123882000
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
123882000
NCBI-ProteinID:
XP_045786725
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Position
LG4:complement(48182479..48184284)
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AA seq
392 aa
AA seq
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MAFNKLINSIFWCFILLVVMVTFFTTNVSSTKQSKIEGMQMNVIDQCWRLNPEWRKHRQQ
LAVCSVGFAGKMTNNIGKDLIHYKVTDPSDHPLNPRPGTLRYGASRIQGKVWITFQKDMN
IKLEKPLLISSFTTIDGRGVNVHIADNACLMIYKTTNIIIHGIRVHHCRPQAAGMVMGPN
GNIMPLGQVDGDAIRLVSASKIWIDHNTLYDCQDGLLDVTRGSTDITISNNWFREQNKVM
LLGHDDGFVRDKNMKVTVVYNYFGPNCNQRMPRIRHGYAHVANNLYMGWVQYAIGGSMEP
SLKSQSNLFIAPTTGKKEVTWRKSSNRIGDMWEFYSVGDAFENGASFMETKGGQVKKPNY
TPEQSFKVADAKFVRSLTRSSGVLQCSKTSIC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaataaattaatcaactccatcttttggtgctttattctacttgttgttatg
gtcacatttttcactacaaatgttagttctaccaagcaatctaagattgaaggcatgcaa
atgaatgtgattgatcaatgttggagactcaatcctgaatggaggaaacatcgacaacaa
cttgctgtttgctcggtaggctttgcaggaaaaatgacaaacaacataggtaaagaccta
atccattataaagttactgatcctagtgaccaccctttaaacccaagacctggaactttg
agatatggagcttctagaattcaaggtaaagtttggatcacatttcaaaaggatatgaac
attaagcttgagaaaccccttctcattagtagtttcaccaccattgacggtcggggtgtc
aatgtccacattgctgataatgcgtgcttgatgatatataagacaacaaacataatcatc
cacgggattagggttcatcattgtcgacctcaagctgctggaatggtgatgggtcccaat
ggaaatataatgccattgggtcaagtggatggagatgcaattagattggtttcagcgtca
aagatttggattgatcataacacactttatgattgccaagatggtcttctagacgttaca
cgaggttccactgatattacaatctccaacaactggtttagagagcaaaataaggttatg
cttcttggacacgatgatggatttgtgagagataaaaacatgaaagtcactgttgtatac
aattattttggacctaattgcaaccaacgcatgcctagaattcgtcatggatatgcacat
gttgcgaataatttgtacatgggatgggtgcaatatgcaataggtggaagtatggaacca
agcctcaaaagccaatcaaacctctttatagcaccaaccacgggaaaaaaggaggtgaca
tggagaaaaagtagtaacagaattggagatatgtgggaattttattcagttggggatgct
tttgaaaatggagcatccttcatggaaacaaaaggcggacaagtgaaaaaaccgaattat
acccctgaacaaagttttaaagttgctgatgccaaatttgtgagatcattgacaagatca
tccggtgtgttacaatgcagtaaaacctcaatatgttga
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