Trifolium pratense (red clover): 123889896
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Entry
123889896 CDS
T08949
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00906
Carotenoid biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M01040
Lutein biosynthesis, plants, lycopene => lutein
tpra_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
123889896
Enzymes [BR:
tpra01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
123889896
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
NAD_binding_8
Thi4
HI0933_like
Pyr_redox_3
Pyr_redox
FAD_binding_2
FAD_binding_3
Trp_halogenase
GIDA
3HCDH_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
123889896
NCBI-ProteinID:
XP_045795361
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Position
LG6:15156771..15158744
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AA seq
501 aa
AA seq
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MIKMDTLLKTPNKLQFLHPLHGYSEKLSNYSLSYKFQNHELRFGSKKKPVLRASSSALLE
LVPEFKKENLDFELPLYDSSKGTVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLI
WPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKC
ISNGVKFHQAKVIKVIHEESKSLLICNDGVTVQATVVLDATGFSKCLVQYDKPYNPGYQV
AYGILAEVDEHPFDVDKMLFMDWRDSHLDNDMKLKERNSKIPTFLYAMPFSSTKIFLEET
SLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAG
MVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEISAQVWKDLWPIERRRQREFFC
FGMDVLLKLDLPGTRRFFNAFFNLEPYYWHGFLSSRLYLPELFTFGLSLFSYASNTSRLE
IMAKGTLPLVNMVNNLIKDKE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatggatactttactcaaaacaccaaacaagcttcaatttttgcacccactt
catggttattcagaaaaattgagcaattattcactttcctataagtttcaaaaccatgaa
cttagatttggttcaaagaaaaaaccagttttgagggctagtagcagtgcccttttggag
cttgttcctgaatttaagaaagagaatttggattttgaacttcctttgtatgattcatca
aagggaactgttgtggatcttgcagttgtgggaggtggtcctgcagggcttgcagtagca
cagcaagtttccgaagcagggctttctgtttgcgctattgatccgaaccctagattgatt
tggcctaataattatggtgtttgggtggatgaatttgaggcaatggatttacttgattgc
cttgataaaacttggtctggtgctgttgtttacatcgacgataaaacgaaaaaggatctt
gatagaccttatggtagggttaataggaagcttttgaagtcaaagatgctacaaaaatgc
atatcaaatggtgtgaagtttcatcaagctaaagttatcaaggttattcacgaggaatcg
aaatcgttgttgatttgtaatgatggtgtcacggttcaggctactgtggttcttgatgct
actggcttttcaaaatgtctggtccagtatgataaaccgtataatccgggttaccaagtt
gcgtatgggattttggctgaggttgatgaacatccgtttgatgttgataaaatgcttttt
atggactggagagattcacatctagacaatgatatgaagctcaaggagagaaatagtaaa
atacctacttttctatatgcaatgcccttttcatccacaaagatatttctcgaagaaacc
tcgcttgttgctcgccctgggttacggatggatgatatacaagatagaatggttgctagg
ttgaaacacttgggtatcaatgtgaaaagcattgaagaagatgaacagtgtgtcattcca
atgggtggccctctcccggttctccctcagagagttgttggaatcggtggtacagctggg
atggtgcatccttctaccgggtatatggtagcaagaaccctagctgcagctcctattgtt
gctaatgctattgttcagtatcttggttctgatagaggccttttaggagacgaaatatct
gcacaagtatggaaagacttatggccgatcgaaagaaggcgacaaagggagttcttctgt
tttggtatggacgtcttactcaagcttgatttacctggcacaagaagatttttcaatgcg
ttttttaatctggaaccttattattggcatggattcttatcatcaagactgtatcttcct
gagctgtttacttttggattatctctattttcttatgcctcaaatacatctaggctagag
attatggcaaagggaactcttcctttggtaaatatggtcaacaacttgataaaagataaa
gaataa
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