Trifolium pratense (red clover): 123890205
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Entry
123890205 CDS
T08949
Name
(RefSeq) nuclear pore complex protein NUP205 isoform X1
KO
K14310
nuclear pore complex protein Nup205
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123890205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123890205
03036 Chromosome and associated proteins [BR:
tpra03036
]
123890205
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123890205
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123890205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
123890205
NCBI-ProteinID:
XP_045795718
LinkDB
All DBs
Position
LG6:complement(37062299..37086745)
Genome browser
AA seq
1918 aa
AA seq
DB search
MVSPKQLLSTLESALLGSSPPTPSQRVEVLHAIRTSLQSFQSLLSYPPPKPSDRSQVQSK
SIRLQDSSLITLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAA
GLWYTERRYLITSVHLLLRAVVLDQGLEDDILVDIQKYLEDVINSGLRQRLISLIKELNR
EEPSGVGGPQCERYVIDSRGSLVERQSVVSRERLILGHCLVLSVLVVRTSPKDVKDLFSI
LKDSASEVSQSNIAIKHQITFSLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELV
MATGNDPIVEGFAGGIRLAWVVHLMLIQEGVAARETVSSASSNEMSYLSQCLEVVFSNNV
FQFLLEKVLRTAAFQTEDEDMIYMYNAYLHKLITCFLSNPLARDKIKESKEKVMSVLSPY
RVVGSHDFAQNSSSISQQGTETGSLPFNSILDFVSEVYLKEPELLLGNDALWTFVNFAGE
DHTNFQTLVAFLNMLSTLASSHEGASKVHELLQGKAFRSIGWSTLFECLTIYDEKFKQSL
QTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYL
KGALRNAIATFIHVSPVLKDSIWTFLEQYDLPVVVGPEAQGSPSMGTQVYDMQFELNEIE
ARREQYPSTVSFLNLINALIAEERDLTDRGRRFIGIFRFIYDHVFGPYPQRAYADPCEKW
QLVGACLKHFHMILTMYDIKEEDYEGVVDQSRLSTTKESSSLQTQLPVLELLKDFMSGKT
VFRNIMSILLPGVNSIIAERSSQIHGQYLENAVQLSLEIIILVFEKDLLLSDYWRPLYQP
LDIILSHDHNQIVALLEYVRYDFQPQVQQSSIKIMSILRHSIPFHFLILNLTECHSESAI
DIFVLCGCSSRMVGLVQLLLKSNASNSLIEDYAACLEARSEESQNVENNNNKNNNDPGIL
ILQLLIDNISRPAPNITHLLLKFDLDTPVERTVLQPKFYYSCMKVILDILEKLLKPDLNA
LLHEFSFQLLYELCIDPFTSAPTMDLLSNKKYGFFVKHLDTIGIAPLPKRNNNQPLRISS
LHQRAWLLKLLAVELHAGDVSSSNHRDTCQTILSNIFGQGTTGIDEDQAIYPFSLHDNSG
NADYRTVSKNKVLELLEIIQFRCPDTTTKLSYTMAGTKYDLLAEDILGNSGKGGVYYYSE
RGDRLIDLASFHDKLWQKYNSAYLQVSNLGSEVELNDARETIQQLLRWGWKYNKNLEEQA
SQLHMLTAWSQIVEVSASRRLAMLEDRSEILFRILDASLSASASPDCSLKMAFILSQVGL
TCMAKLRDERFMFPGSLSSDSITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRR
RQYALLLSYFQYCLNVVDPDVPTSVLQFLLLSEQDSEYIDLPKIDKEQAELARANFSTLR
KEAQSILDLVIKDATHGSEPGKTISLYVLDALICIDHERYFLSQLQSRGFLRSCLNAISN
ISNQDGGLSLDSLQRACTFEAVLAVLLRISHKYGKSGAQVLFTMGILEHLSSGRATNLQG
GLRWVETRLRRDMAVDIDRQRMIITPVLRLVFSLTSLVDTSDYMEVKNKIVREVVDFVKG
HQSLFDQVLRLEIAEADELRMEQINLVVGILSKVWPYEESDEHGFVQGLFGLMNVLFSRD
SNSKVLGFPRSRVSPENQRSSELQIFKLCFSLSSYLYFLVTKKSLRLQSSDASSNYPTSV
GFQQPTLSLLNSLLTSATNALERAAEEKSLLLNKIRDINELSRQEVDEIISMCVRQESVS
SSDNIQKRRYIAMVEMCRVVSCTDQLIVLLLPLSEHVLNIFLIHLQDCSDAFESTMTTKT
ITYGATYDPQQDFALLCGQLVPTLERLESLSEEKLGHNLKVFCRLATSAKEIAIQKMV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtttctccgaagcaacttctatcaacacttgaatcagcgcttctcggttcatctcct
ccaacgccatcgcaacgtgtcgaagttttgcacgccattcgcacttctcttcaatccttc
caatcccttctatcgtatccgcctccaaaaccctctgatcgaagtcaagttcagtcaaag
tcaattaggcttcaagattcttctcttatcactcttgatgaccaggatgtgcaaattgca
ctcaaattgagcgatgatctgcatctaaatgaagttgattgcgttcgcttgctagtatcg
gctaatcaagagtggggtttaatgggtagggaaccgctggaaattctacggcttgcagca
ggactctggtatacagaaagaagatatctgataacatccgtccatcttctgttgagggct
gtggtgcttgatcagggacttgaagatgatatattggttgacatacaaaaatatctagaa
gatgtaatcaattctggacttcgacagcggttgatttctcttatcaaggaactcaataga
gaagagccttctggcgtgggaggtcctcagtgtgaacgctatgttattgattcaagaggt
tctcttgtggagaggcagtcagttgtctccagggaaagacttattttgggacactgtctt
gtcctttctgttctggttgttcgaacaagtcctaaggatgtaaaagacttattctctatt
ttgaaagacagtgcttccgaagttagtcagagcaatattgccataaaacatcagattacc
tttagccttctatttgcccttgtaattgcatttgtatcagatggtttgagtacagtgccg
gacaaagcatctgtcctttcttcaaacacatccttcagacatgaatttcacgaacttgta
atggccactggaaatgatccaattgttgagggattcgctggtggcataaggcttgcttgg
gtggtacatttgatgttaatacaagaaggtgttgcagcaagggaaactgtttcaagtgct
tcatcaaatgaaatgagttaccttagtcaatgcttggaagtcgttttttcaaataatgtc
tttcagtttttactggagaaagttcttcgaactgctgcctttcagacagaagatgaagat
atgatatatatgtacaatgcttatttgcacaagctgattacatgcttcttgtctaaccct
ctagctagagacaagataaaagaatccaaggaaaaggttatgagtgtgcttagtccatac
agagttgttggatcacatgattttgcacagaacagtagctcaatttctcaacaaggcact
gaaacaggctctttaccatttaattcaatcttggactttgtgagcgaagtttatctgaaa
gaaccagagcttttgttgggaaatgacgcgctgtggacatttgtaaattttgctggagaa
gaccatacaaattttcaaacgcttgtggctttcttgaatatgctgagtaccttggcttct
agtcatgaaggtgcttcgaaggttcacgagttgctgcaaggtaaagcattccgctcgatt
ggctggagcactttgtttgaatgcttaacaatttatgatgagaaattcaaacagtccctt
caaacggctggagcaatgttgcctgaaattcaggagggggatgcaaaagcacttgtcgca
tatttaaatgttctgaagaaggttgtggaaaatggaaaccctatagaaaggaaaaactgg
tttcctgatattgaaccactgtttaaactgcttagttatgaaaacgtacccccttatctt
aagggcgctttaaggaatgcaatagccacatttattcatgtctctccagtgttgaaggat
agcatatggacctttcttgagcaatatgatctgccagtagttgttgggcctgaagcccag
ggcagtccatccatgggtactcaggtttatgatatgcaatttgaattaaatgagattgag
gcaagaagagaacaatacccttcaactgtatctttccttaatttgataaatgctcttatt
gcggaagaaagagatttgactgatagagggcgaagatttattggaatatttaggttcatc
tacgatcatgtttttgggccatatcctcaaagagcatatgcagatccatgcgaaaaatgg
cagttggttggtgcttgccttaaacattttcacatgatactaaccatgtatgacattaag
gaagaagactatgagggtgtagttgaccagtcccgactttcaacaacaaaagaatcatca
tcacttcagacacaacttcctgttttagagttgctgaaggatttcatgagtggaaagact
gtcttccgaaacatcatgagtattcttctgccaggggtgaattccatcattgctgaacgc
agcagtcaaatacatgggcagtatttagagaacgcggtgcaactttctttggaaattata
atacttgtctttgaaaaagacttacttctttctgattattggcgtccactgtaccagcca
ttggatattatactctcacatgatcacaatcaaatagtggctcttttggagtatgtcaga
tatgattttcaaccacaagttcagcaatcatctatcaaaatcatgagtattttaaggcat
tcaatacctttccattttcttattctcaatttaacagaatgtcattctgagtctgcaatt
gatatatttgtgctttgtgggtgcagctctcgtatggttgggcttgttcaactattgcta
aaatctaatgcctcaaatagcttgatagaagattatgcagcctgccttgaggcacggtca
gaagaatctcagaatgttgaaaataataataataaaaataataatgatcctggcattctt
attctgcaacttctaattgacaacatcagtcggccagctccaaatatcactcatttacta
cttaaatttgatctagatacgcctgttgagcggacagttttacagcctaaattttattac
agttgcatgaaggttattcttgatattctggagaagcttttgaagccagatttaaatgca
ttacttcatgaatttagttttcagcttctttatgagttgtgcattgatccatttacatct
gctcctacaatggatctgttgtcaaataaaaagtatggattctttgtcaagcaccttgac
acaattggcattgctccacttcctaaacgtaacaacaaccagccgcttcgtattagttcc
cttcatcagagagcatggctcttaaaacttttagcagttgagctacatgctggtgatgtt
agtagttccaaccatagagacacttgtcagacaatcctttctaatatttttggacaaggt
acaactggaattgatgaagaccaggccatatatccattttcacttcacgataattctgga
aatgctgattatagaactgttagtaagaataaggtattagaattgcttgaaatcatccag
tttagatgtccagataccactactaagctgtcatatactatggccggcacgaagtatgac
ttgctggcagaagacatactgggaaattctggaaaaggtggtgtctactattattctgag
agaggtgaccgactaattgaccttgcttccttccatgacaaactttggcagaaatataat
tctgcatatcttcaggtgagtaatcttggcagtgaagttgagctaaatgatgcacgagag
acaattcaacagttgctgagatggggatggaaatacaataaaaatcttgaagagcaagct
tcacaactacatatgttgactgcctggtctcagattgttgaggtgtctgcatctagaaga
ttagcaatgcttgaagatcggtctgaaattctctttcggatccttgatgcgtctctcagt
gcatctgcttctccagactgttcactgaagatggcattcatattatcacaggtaggattg
acatgcatggctaagctgcgagatgaaaggtttatgttcccaggaagtctaagttctgac
agtataacatgccttgatcttattgtggttaaacaattatcaaatggtgcttgcttgacc
atattgtttaagcttatcatggcaattcttagaaatgaatcatcagaagctcttagaaga
cgccaatatgccttgcttcttagctatttccagtattgtttgaatgtggttgatcctgat
gttccaacctcagttcttcaattcttgctgctcagtgaacaagatagtgaatatattgat
ctcccaaagattgacaaagaacaggcagaactggctcgtgcaaatttttctactttgagg
aaagaggctcaaagcatattggacttggtcataaaggacgcaacccatggcagtgaacct
ggaaaaacaatatcactctatgttcttgatgcgttgatttgtatagatcatgagcgatat
ttcttgagccaacttcaaagcaggggatttttaaggtcttgccttaatgccataagcaat
atttccaatcaggatggtggtctctcacttgactctttgcagagggcatgtacgtttgag
gctgtacttgctgttctactaagaatcagtcacaaatatgggaaatctggagcacaggta
ctatttaccatgggcatattggaacatctttcatcaggcagggcaaccaatttgcaggga
ggattaagatgggttgagacaagacttaggagggatatggctgtggatattgatagacaa
cggatgattataactccggtcttgagattagtcttctcattaacttcgttggttgataca
tcagattatatggaggtgaaaaacaaaattgttcgtgaagtggttgattttgtcaaaggt
catcaatcactctttgatcaagttctccgtttagaaattgctgaagcggatgaattaaga
atggagcagatcaatcttgttgttggtattctgagcaaggtttggccatatgaagagagt
gatgagcatggttttgttcaagggctttttggtttgatgaatgttcttttctctcgtgac
tcaaactcgaaggttctaggttttcctcgatcaagagtgtcccctgagaatcagagaagt
tcagagctacagatatttaagttgtgcttcagtctgagctcttacttatattttcttgtc
acaaagaaatccttgagattacagtcttctgatgcctcctccaattaccctacttctgtt
ggatttcaacaacctacattgagcttgcttaattctctactcacttcagctacaaatgca
cttgaaagggcagctgaggagaaatccttattactgaataagattcgagacattaatgaa
ctgtcaaggcaggaggtggatgaaatcatcagtatgtgtgtccggcaagaatctgtttca
tcttctgataacatacaaaaaaggagatacatagcaatggtagagatgtgtcgagtggtt
tcttgtacggatcagctgattgttttattgctcccgctctctgaacatgtgctaaatata
ttcctcatccaccttcaggattgctctgatgcatttgaatctaccatgaccacaaaaaca
attacatatggtgcaacgtatgatccacaacaggactttgctttgttatgtggacagtta
gttccaacccttgaacgacttgagtcgctaagtgaggagaaattagggcataatctcaaa
gtattctgccgattagcaacttctgccaaagagattgcaatccagaagatggtttag
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