Trifolium pratense (red clover): 123898927
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Entry
123898927 CDS
T08949
Name
(RefSeq) synaptotagmin-5-like
KO
K28063
extended synaptotagmin
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123898927
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
123898927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
PDZD8_N
Motif
Other DBs
NCBI-GeneID:
123898927
NCBI-ProteinID:
XP_045805924
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Position
LG7:5812533..5817188
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AA seq
568 aa
AA seq
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MGFFSGMIIGIAIGITLIIAFAKQESTRSKRRTDLAKTIAKFARLTVEDSRKLLPENFYP
SWVVFSQKQKLSSLTWLNSLLDKIWPFVDEAASELIKNNVEPILEQYRPLILSSLTFSTL
TLGTVAPQFTGISIVEEGSGPTGVTMEFDMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFT
GVFRLIFKPLVNDFPAFGAVLFSLREKKALDFTLKVIGGDISALPGVSEAIEETIRDAIE
DSITWPVRKIIPIIPGDYSNLELKPVGTLDVKLVQAKNLTNKDLIGKSDPFAVVFVRPLR
DRTKTSKTINNQLNPIWNEHFEFIIEDASTQHLTIRIFDDEGIQAAELIGCAQVSLKELE
PGKVKVVWLKLVKDLEVHRDNKYRGEVHLELLYCPYGVEHTLKSPFHTDYSLTTFEKTLK
SDTEDDDISAASSRRKSNVIVRGVLSVTVISAEDLPVVDLMGKADPFVVLSLKKSEKKQK
TRVVNESLNPVWNQTFDFVVEDGLHDMLIVELWDHDTFGKEKMGKVIMTLTKVILEGEYD
ETFDLDDAKSGKINLHLRWAAQHKYRDP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggattcttcagcggcatgatcattggtattgcgattggtatcacattgatcatcgct
ttcgctaaacaagaaagcacccgatccaagcgtcgcaccgatttggcgaagacgatagca
aagtttgcgaggttaacggtggaagattctagaaaacttctacctgaaaatttttatccg
tcatgggtggtcttttctcagaaacaaaaattgagttcgttaacttggcttaacagttta
ttagataagatttggcctttcgtcgatgaggcagcatcagaattgataaaaaacaatgtt
gaacctattcttgaacaatatagaccgttgattttgtcgtctctcacattttccacattg
acacttggtactgttgctccacaatttacaggaatttcaattgttgaagagggtagtggg
cctactggagtgacaatggagtttgacatgcagtgggatggcaaccccaatattgttctt
gacattaaaaccagagttggtgttgtattgcctgtgcaggtaaaaaatattggattcact
ggggttttcaggttgatcttcaaacctctagtaaatgattttcctgcttttggagctgtt
ttattttccctaagagaaaagaaagctcttgattttactcttaaggttattggtggtgat
atttcagccttaccaggggtatctgaagctatagaggaaaccattcgagatgccatcgaa
gactctataacttggccagtacgcaaaattataccaattataccaggagattacagtaac
ctggaactgaaacctgttggaacactagatgtaaaactagtgcaagcaaagaacttaaca
aataaagatttaattgggaaatctgatccttttgctgtcgtatttgtacgtccacttcgc
gacagaaccaaaactagtaaaacaatcaataaccagttgaatccaatatggaatgagcac
tttgaattcattattgaagatgcatcaacacaacacttgaccataagaatcttcgacgac
gaaggaattcaggcagctgagcttattggttgtgcccaagtttccctaaaggaacttgaa
cctggtaaagtcaaggttgtatggttgaaattagttaaggatttagaggtccatagagat
aacaaatacaggggtgaggtgcacttggagctcttgtactgcccatatggagttgagcac
actcttaagagccctttccacactgattactcattaaccacgttcgaaaagactctcaag
agcgacacagaggatgatgatatttcagcagcatcatcacgaagaaaaagcaatgtaatt
gtaagaggagttctatcggtcactgtaatttcagctgaagacttaccggtagtcgattta
atgggcaaggctgacccgtttgttgtcctttcattgaaaaaatcggaaaaaaaacaaaag
acaagagttgtaaatgaaagtctaaatccagtttggaatcaaacatttgacttcgttgta
gaagatggcttacacgacatgttaattgttgaactttgggatcatgatacatttggcaag
gaaaaaatgggtaaagtgatcatgacactaaccaaagtcatcttagaaggggaatacgac
gaaacatttgatttggatgatgctaaatccggaaagattaatttgcatttaagatgggct
gcacaacataagtaccgtgacccttaa
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