Trifolium pratense (red clover): 123905990
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Entry
123905990 CDS
T08949
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123905990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123905990
03036 Chromosome and associated proteins [BR:
tpra03036
]
123905990
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
123905990
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
123905990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_Gbeta
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
RMC1_N
Tricorn_2nd
DPPIV_N
DUF1513
PD40
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
123905990
NCBI-ProteinID:
XP_045811772
LinkDB
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Position
LG2:42339029..42341904
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AA seq
450 aa
AA seq
DB search
MDSGSLSSSAVKIGSRYPLQRKTSKDNLDRFIPNRSAMDFDYAHYMLTEGAKGKENPVVC
SPSREAYRKLLAESLNMNRTRILAFKNKPPTPVDLIPHEITLSTHQQDRTAKPRRIIPQT
SERTLDAPDLVDDYYLNLLDWGSANVLAIALGNTVYLWDASNGSTSELVTVDDENGPITS
VSWAPDGRHIAVGLNNSEVQLWDTASDKQLRTLRGGHRQRVGSLAWNNHILTTGGMDGRI
INNDVRIRSPIVETYRGHEQEVCGLKWSASGQQLASGGNDNLLYIWDRGTASSSSPTQWL
HRLEDHTSAVKALAWCPFQGNLLATGGGSGDRSIKFWNTHTGACLNSVDTGSQVCSLLWN
KNERELLSSHGFTQNQLTLWKYPSMVKMGELNGHTSRVLYMAQSPDGCTVATAAADETLR
FWNAFGTPKVVAKAAPKARAEPFSHINRIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggatctttgagttcttccgccgtcaaaattggatcacgctatcctcttcag
agaaagacttccaaagataatttggacagatttataccgaatagatccgcaatggacttc
gattatgctcactacatgctaacagaaggggctaaaggtaaggaaaacccagttgtgtgc
tccccttccagagaggcttacaggaagctacttgcagaatctttgaacatgaaccggacc
agaattctagctttcaagaacaagccgcctacaccagttgatttgatccctcatgagatt
actttatcaactcatcaacaagatagaaccgccaagccaaggcgaattattcctcagact
tctgagaggacattggatgctcctgaccttgtggatgattattacctcaatttattggat
tggggaagtgccaatgttcttgctatagcacttggaaacacagtgtatttgtgggatgca
tcaaacggttccacttcagaactcgttaccgtggatgacgaaaacggcccgatcacatcc
gtaagctgggctcctgatgggcgtcatattgctgttggtttgaacaactctgaagttcaa
ctgtgggatactgcttcggataagcagttgagaactttaagaggtgggcataggcagcgt
gtggggtctttggcatggaacaatcacatactaacaactggagggatggatggtagaatc
atcaataatgatgtaagaattagatcacccattgttgaaacatacagagggcatgagcaa
gaagtttgtgggttgaaatggtctgcttcaggtcaacaattagccagtggagggaatgat
aatctactttatatctgggatagaggtacagcatcttctagttccccaacacagtggctt
cacaggcttgaggatcatacatctgcagtaaaggcacttgcttggtgtcctttccaaggg
aatttgctagctactggtggaggtagtggcgatcgaagcatcaagttttggaatacacac
acaggtgcatgcttgaactcagttgacactgggtctcaggtatgttccctgttgtggaac
aagaatgagagggagttgctcagctctcatggatttacacagaatcagctaacactttgg
aaatatccttcaatggtgaagatgggagagctcaatggtcacacttcaagagttctttat
atggcgcagagcccggatggttgcacagtggcaacagcagccgcagacgaaacattgagg
ttttggaatgcttttggcactccaaaagtagttgccaaagctgcgccaaaagcgagagct
gagccattttcacatattaatcgcattcgataa
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