Trifolium pratense (red clover): 123914224
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Entry
123914224 CDS
T08949
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123914224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123914224
Ubiquitin system [BR:
tpra04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123914224
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
123914224
NCBI-ProteinID:
XP_045821252
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All DBs
Position
LG3:11224576..11227614
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AA seq
685 aa
AA seq
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MQIFVKALTGKTVTLEVESSDTIDNVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIENVKVKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgttaaggcgcttacaggcaagaccgttactctcgaagttgagagttca
gataccatagacaatgttaaggccaagattcaagataaggaagggatcccatcagaccag
cagcgtctgatttttgctggaaagcagctggaggatgggcgtacccttgctgattacaac
atccaaaaggagtccaccctccatttggtgctccgtcttcgtggtggtatgcaaatcttt
gtgaagactctcaccggaaagaccgtcaccctggaggttgagagttcggatacgatagaa
aatgtcaaggtcaagattcaagacaaggaaggtattccaccagaccagcaaaggctgatt
tttgctggaaaacagcttgaggatggcaggacattagctgattacaacatccagaaggaa
tccacccttcatcttgtcttgcgacttcgtggtggtatgcagatttttgttaagacgctt
acaggcaaaacgattactttggaggttgagagctcagatacgattgacaatgttaaggcc
aagattcaagacaaggagggtattcccccagaccagcaaaggctgatttttgccggaaag
cagctggaagatggccgaaccttggccgattacaacatccagaaggaatccacccttcat
cttgtcttgcgacttcgtggtggtatgcagatttttgttaagacccttacaggcaaaaca
attactttggaggttgagagctcagacacgattgacaatgtaaaggccaagattcaagac
aaggagggtattcccccagaccagcaaaggctgatttttgccggaaagcagctggaagat
ggccgaaccttggccgattacaacatccagaaggaatccacccttcatcttgtcttgcga
cttcgtggtggtatgcagatttttgttaagacccttacaggcaaaacaattactttggag
gttgagagctcagacacgattgacaatgtaaaggccaagattcaagacaaggagggtatt
cctccagaccagcaaaggcttatttttgctggaaagcagctggaagatggccgaaccttg
gccgattacaacatccagaaggaatccacccttcatcttgtcttgcgacttcgtggtggt
atgcagatttttgttaagacgcttacaggcaagaccattactttggaggtagaaagctca
gacacaattgacaatgtgaaggccaagatacaagacaaggagggtattcctccagaccag
caaaggttgatttttgccggaaagcagctggaagatggtcgaaccttggccgattacaac
atccagaaggaatccacccttcatcttgtccttcgtttgaggggaggcatgcaaatcttt
gtaaagacattgacaggcaagaccattactttggaggtagagagctcagacacaattgac
aatgtgaaggctaagatacaagacaaagagggtatccctccagaccagcagaggctcatt
tttgctggaaagcagcttgaagatggcagaactcttgctgactataacatccagaaagag
tcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagattttcgtgaagactctt
accggaaagactattaccttggaggtagagagctcagacactattgacaatgtgaagacc
aagatacaggacaaagaaggtattcccccagaccagcaaaggttgatatttgctggaaag
cagcttgaagatggccggactttggctgattataatattcagaaagagtccacgcttcac
cttgtccttcgtctgaggggaggtatgcaaatctttgtgaagacgctgaccggaaagacc
attaccttggaggtagaaagttcagacacaattgataatgtgaagtcaaaaatacaggat
aaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggat
ggtaggactcttgctgactacaacattcagaaggagtctactcttcatcttgttttgcgc
cttcgcggtggattttaa
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