Trifolium pratense (red clover): 123919499
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Entry
123919499 CDS
T08949
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123919499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123919499
03036 Chromosome and associated proteins [BR:
tpra03036
]
123919499
Spliceosome [BR:
tpra03041
]
Complex B
Other components
Prp19-related factors
123919499
Complex C
123919499
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
123919499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_17
HAT_Syf1_M
Mad3_BUB1_I
BTB_2
Motif
Other DBs
NCBI-GeneID:
123919499
NCBI-ProteinID:
XP_045827373
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All DBs
Position
LG4:3520936..3524505
Genome browser
AA seq
558 aa
AA seq
DB search
MKNKFIDHARNVWDRAVTLLPRVDQLWFKYVHMEEMLGNVAGAREVFERWMKWMPIQYGW
LCYIKFELRYNEIERARMIFERFVMCHPSVDAWIRYANFEVKNGEVVKARNVYERGVEKV
AEDEEEAEKLFVAFAAFEERCKEVERARCIYKFALDRIPKGKAEELFSKFVAFEKQYGDK
EGIEDALIGKRRFQYEEEVRKNPLNYDAWFDYIGLEESAGNKERTRDVYERAIANVPPAE
EKRYWQRYIYLWINYALYEELDAGDMERTRVVYRECLNQIPHHKFSFAKVWLLAAQFEIR
QLNLKGARQILGNAIGKAPKSKIFKKYIEMELQLSNIDRCRKLYEKYLQWSPENCYAWSK
YAELERSLSETDRARAIFDLAIGQPALDMPELLWKTYIDFEISEFEFERARGLYERLLDR
TKHLKVWISYADFEATATDKRCLDLSEQEQKKQCIQRARRVFEEALNYFRSSAPDLKEER
AMLLDKWIDLEVSSGELGDVSLVQSKLPKKLKKRRQVSTEEDGSSRIEEFIDYLFPEETQ
TTNLKILEAAYKWKKQKL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagtttatagatcatgctaggaatgtttgggaccgtgctgttactctcttg
ccgcgagttgatcagttgtggtttaagtatgttcatatggaggagatgttaggtaatgtt
gctggtgctagagaggtttttgagaggtggatgaaatggatgccaattcagtatggatgg
ttgtgttacattaaatttgaacttaggtacaatgaaatcgaacgggccagaatgatattc
gagaggtttgttatgtgccatccaagcgttgatgcttggattcgttatgctaattttgag
gtgaagaatggcgaggttgttaaggcaaggaatgtgtatgaaagaggggttgagaaggtt
gcagaggatgaggaggaagctgagaagctttttgtggcttttgctgcttttgaggaaaga
tgcaaggaggtagagcgtgctagatgtatatacaaatttgcgcttgatcgtataccaaag
ggaaaggcggaagaactatttagcaagtttgtggcatttgagaaacagtatggtgataag
gaagggattgaggatgccctcatcgggaaaagaaggttccagtacgaagaggaagtgcga
aaaaatcctttgaattatgatgcttggtttgattatattggattagaagaaagcgcgggg
aacaaagaaagaactagggatgtttacgagagggcgatagctaatgtgcctccagctgag
gagaagcgatactggcagcgatatatttatttatggattaattatgcactctatgaagag
cttgatgccggagatatggagcgaacaagagtcgtttacagggaatgtctcaaccagata
cctcaccacaagttctcgtttgcaaaagtatggcttctggcagcccaatttgaaatacgt
cagttgaatctcaagggtgctcgtcaaatattaggaaatgcgattggaaaggctcctaaa
agcaagatatttaagaagtatatagagatggaactgcagcttagcaatatagatcgatgc
agaaaactgtacgaaaagtatctgcagtggtcacctgaaaattgctatgcctggagcaaa
tatgcagaactggagagatctctatcggagacggatcgggctcgagcaatatttgatctt
gcaattggtcaaccggcattggacatgcctgagttgttgtggaagacgtacattgatttt
gaaatttccgagtttgaattcgagagagcgcgggggctttatgaaaggcttcttgatcga
acaaagcacctgaaggtatggataagttatgcagattttgaagcaacagccactgataag
aggtgtttagatttatcagaacaagaacaaaagaagcaatgcattcagcgcgctagaagg
gtgtttgaggaagctctaaactacttcagatcatcagctccagatttaaaagaagaaagg
gcaatgctactggataaatggatcgatttggaggtttcatctggggaactaggtgatgtt
agcttggtccagtctaagctgcccaagaagctcaagaagagacggcaagttagcactgaa
gaagacggttcttctagaattgaagaatttatcgactatctattccctgaagaaactcaa
accaccaatctcaagatattggaagctgcttacaaatggaagaagcagaaattgtga
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