Trifolium pratense (red clover): 123919910
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Entry
123919910 CDS
T08949
Name
(RefSeq) ABC transporter F family member 1 isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123919910
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123919910
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_15
AAA_30
AAA_14
MMR_HSR1
AAA_28
RsgA_GTPase
AAA_27
AAA_22
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
123919910
NCBI-ProteinID:
XP_045827903
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Position
LG4:16952489..16957370
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AA seq
591 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAVAAASSKAADKVADKIADIRISDRTCTGVLCSHP
LSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGMRELPIPEH
MDIHHLSREIEASDMSALEAVISCDEERLKLEHEAEILAAQDDGGGEALERIYERLDALD
ASTAEKRAAEILHGLGFDKAMQAKKTRDFSGGWRMRIALARALFMNPTVLLLDEPTNHLD
LEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKMYTGNYDQYVQTRGDL
EENQMKQYKWEQEQIANMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDQV
LVFRFTDVGKLPPPVLQFSEVSFGYTPDHLIYKNIDFGVDLDSRIALVGPNGAGKSTLLK
LMTGDLFPSDGMVKRHNHLRIAQYHQHLAEKLDLDVPALQFMMNEYPGNEEEKMRAAIGR
FGLTGKAQVMPMKNLSDGQKSRVIFAWLAWRQPQLLLLDEPTNHLDIETIDSLAEALNEW
DGGLVLVSHDFRLINQVAHEIWVCENLKVTRWEGDIMDFKKHLKAKAGIVD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgacgctagcaagaagaaagccgctcaaaagaaagctgccgcagccgccaaa
cgaggtggtaaagccgccgttgcagctgcttcttccaaggccgctgataaagttgccgat
aagattgccgatattcgcatatcggatcgcacttgcaccggtgttctctgttctcatcct
ctctctagagatatccggatagagtctctatcggttactttccatggacatgatctcata
gttgattctgaattggagctaaattatggaagacgttatggattacttgggttaaatggt
tgtggaaagtccactttacttactgcaatagggatgcgggaacttccaattcccgaacac
atggatattcatcaccttagcagagaaattgaagcctctgacatgtctgctttggaagct
gtaataagctgtgatgaagaaaggttgaaattggagcacgaagctgaaattttggcagct
caggatgacggaggtggtgaagccctcgaacgtatttatgaacgattggatgccctagat
gcatcaacggcagaaaagcgtgccgctgaaattttacatggtcttggttttgacaaggca
atgcaagctaagaagactcgtgatttttctggaggctggagaatgcgaattgcattagca
agagctttatttatgaatcccactgttcttttactcgatgaaccaaccaatcatctcgat
ttggaagcttgtgtgtggctggaggagagtttgaagaagtttgaacgtattttggttgtt
atttcacattcccaggatttccttaacggtgtctgcacaaatattatccacatgcaaagt
aagaaattgaagatgtatactggtaattatgatcaatatgttcagactcgtggtgactta
gaagagaaccagatgaagcagtacaagtgggagcaagagcagattgccaacatgaaggaa
tatattgctcgatttggtcatggttcagcaaaactagctcgccaggcacaaagtaaggaa
aaaacactggcaaaaatggaacgaggtggacttaccgagaaggtagttagagatcaagtt
ttagtattccgctttactgatgtgggaaaacttccccctcctgttctacagttttctgaa
gtaagttttgggtacactcctgatcatctcatctacaaaaacattgattttggggttgac
ttagactctaggattgctcttgttggaccaaatggtgccggaaagagcacactgctgaag
ctaatgacaggtgatttgtttcctagtgatggcatggtcaagcgtcataatcatcttaga
attgcacaatatcatcagcacttggctgaaaagttagacttagatgttcctgcccttcag
tttatgatgaatgaataccctggaaatgaggaagagaagatgagggctgctattgggagg
tttggactgacaggtaaagcccaggtgatgcctatgaagaatttgtctgatgggcaaaag
agtcgagtgatatttgcttggttagcttggaggcagcctcaattgctacttttggatgag
ccaactaatcatttggatatcgaaacaattgactcactggctgaggcattgaatgagtgg
gatggcggcttggtgcttgttagtcacgattttaggctcattaatcaggttgcacatgaa
atatgggtgtgtgaaaatctaaaagtgaccagatgggagggtgacattatggatttcaag
aagcatctaaaggcaaaggcagggatagtggactga
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