Trichogramma pretiosum: 106648172
Help
Entry
106648172 CDS
T07644
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106648172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106648172
Enzymes [BR:
tpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106648172
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106648172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
nSTAND3
AAA_16
AAA_22
CbiA
CTV_P13
TniB
MMR_HSR1
AAA_14
AAA_PrkA
ATPase_2
AAA_18
GTP_EFTU
AAA_10
Motif
Other DBs
NCBI-GeneID:
106648172
NCBI-ProteinID:
XP_014220345
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MSEDKAIFQEFKLDPDNELRFEVEDKDEKVTLELKSGLAEVFGTELVKGKKYEFTCGSKI
AVYTWQGCVVELGGKTGVSYVSKETPMSLYLNCHAAMERLRETAEKNDSRGPILMVVGPC
DVGKSTLCRLLLNYAVRMGRRPIYVDLDVGQGHIAIPGTVGALLVERQSNVVDGFNQQAP
LVFHYGHKSPQTNIVLYNLLVTRLAEVCSGRLQGNKKAKASGIVINTCGWVKGGGYKILT
HAAQAFEVDSILVLDQERLYNDLARDMPDFVKVVFLPKSGGIVERSQAERKDSREQSIRE
YFYGSRTPLYPHNFEVKWSEAKLFKIGAPIVPTSCLPLGMKTEDNVTKLIPVTPGPGLLH
HILSVSFADSPEDDVVQTNVAGFVCVTNVDVDRQTFTILSPQSRPLPNHILLLSEIQFID
TL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagacaaagccatattccaggaattcaaattagatcctgataatgagctacgt
tttgaagtagaggataaagatgaaaaagtaactttagagttgaaaagtggtcttgcagaa
gtttttggaacagaactggtaaaaggcaaaaagtatgaatttacttgtggatccaaaatt
gccgtttatacttggcaaggttgcgtagttgaattaggaggtaaaacaggagtgagttat
gtgtccaaagaaactcccatgagtttatatctgaattgtcatgcagcaatggaaagatta
agagaaacagctgaaaaaaatgattctagaggacctatcttaatggttgttggtccttgt
gatgtaggcaaatcaacattgtgtagacttttattaaattatgctgtaagaatgggaagg
cgacctatttatgtggatttagatgtaggacaaggacatattgctataccaggaacagtt
ggagctttacttgttgaaagacaatctaatgttgttgatggatttaatcaacaagcacca
ttagtatttcattatggacataaatcaccacaaacaaatatagttttgtataatcttctt
gtaacacgattagctgaagtttgctcaggtagattacaaggaaacaaaaaagctaaagct
tcaggcatagttattaatacttgtggatgggttaaaggtggtggttacaaaattttgact
catgctgctcaagcatttgaagttgattcaattctagttttagatcaagaaagactttac
aatgatttagctagagatatgccagattttgtaaaagtggtatttcttccaaaaagtggt
ggtatcgttgaaagatctcaagccgaaagaaaagatagccgtgagcaatccattagagaa
tatttttatggttctagaactccattatatcctcacaattttgaagtgaagtggagtgag
gcaaaattattcaaaattggggcaccaattgtaccaacatcgtgtcttccattaggtatg
aagactgaagacaatgtaacaaaattaattccagtaactccagggcctggattattacat
cacatactatcagtatcatttgctgattctccagaagatgatgtagtacaaacaaatgtt
gcaggatttgtgtgtgtaactaacgttgatgttgatcgtcaaacttttactatactcagt
cctcagtctagaccattaccgaatcatattttattacttagtgaaatacaatttattgat
actctataa
DBGET
integrated database retrieval system
