Thermococcus profundus: A3L09_10235
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Entry
A3L09_10235 CDS
T05153
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tprf
Thermococcus profundus
Brite
KEGG Orthology (KO) [BR:
tprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tprf03016
]
A3L09_10235
Enzymes [BR:
tprf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A3L09_10235
Transfer RNA biogenesis [BR:
tprf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A3L09_10235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF1045
STAS
Motif
Other DBs
NCBI-ProteinID:
ASJ03609
UniProt:
A0A2Z2MDJ9
LinkDB
All DBs
Position
1932767..1933321
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AA seq
184 aa
AA seq
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MRAFIAIEVSDTVRNNLIKAQERIGSKAAKIKFVERENFHVTLKFLGEIDEATAEEVKKA
LAEIAKKHKKHRAKVKGIGVFPNPNYVRVIWAGIENDEGIKAIANDVEREMRRLGFKKDK
DFVAHITIGRVKFVRDKLELAMALKDLANEDFGEFDVEAIELKKSTLTPKGPIYETVARF
ELAE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggctttcatagccatagaggttagcgataccgtcaggaacaacctcattaaagcc
caggagcggataggaagcaaggctgctaagataaagttcgtcgagagggaaaacttccat
gtgacgctcaagttcctaggtgagatagatgaggccaccgcagaggaagtgaagaaggct
ctagcagagatagcgaagaagcacaaaaaacacagagcaaaggtgaagggaataggcgtc
ttcccgaacccgaactacgtgagggttatttgggctggaatagagaacgacgaggggata
aaggccatagcgaacgacgtcgagagggagatgcgccgtctgggcttcaagaaggataag
gatttcgtcgctcacatcacaatcggccgcgttaagttcgtgcgcgacaagctggagctg
gcgatggcattgaaagatctcgccaatgaggacttcggagagttcgatgttgaggcgata
gagctgaagaagagcacactgacaccaaaggggccgatatacgaaacggtggcaaggttc
gagctggccgaatga
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