Thalassiosira pseudonana: THAPSDRAFT_20874
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Entry
THAPSDRAFT_20874 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02068
UDP-glucose/iron transport system ATP-binding protein
K02069
UDP-glucose/iron transport system permease protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_20874
Transporters [BR:
tps02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
UDP-glucose/iron transporter
THAPSDRAFT_20874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0014
ABC_tran
SMC_N
AAA_21
AAA_25
NACHT
Rad17
AAA_22
AAA_16
AAA_23
AAA_29
RsgA_GTPase
CCDC22_CC
TsaE
AAA_18
AAA_5
RNA_helicase
AAA_33
AAA
AAA_28
Motif
Other DBs
NCBI-GeneID:
7446781
NCBI-ProteinID:
XP_002286847
JGI:
20874
UniProt:
B8BR80
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Position
1:complement(1780533..1782363)
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AA seq
594 aa
AA seq
DB search
MTTHTANSRWLQFSADDEYEPAPDISPSGMAIAAVPVLCVFILSAALRLGNVQTLIIATI
RCVAQLMILGLILYPIFVNNQPYVVIPYIFVMVLFAIREASVKPKHRYKGMRLHMLLSLM
VGLTTSFAFISGLVLKPFPFWDASVMIPVCGMLMGSSVNALSLGMDRLLLSLSDSGGRGS
ARLQTYLACGASRWEASLPSIREAIETGLTPNLNQMSIMGLVSIPGMMAGQILGGTSPLV
AAKYQIIIMFFICSNSTLVLFGTIFQAVFYNLFDKQHRFRSELVSKRKGGKPKDILLAIV
SYTGEKMGLYKDDSDKADIGTTERTFSLNDTKSSTIGMKRGMFETFSSTNTSTNELLRLR
NGEIEFADTLHLSELCLVINEGDLILLQGPSGCGKSTLLRGLALFESFGDSATLEVKGKS
ANGLGGAEYWRAEVCYVRQQGGQGLRGTPQELLRDLSALHSQKKRLEDTVDTSKRLDRLV
RNVQKNIEKLELPVEMMSRRWDELSGGESQRVYLCVLLALCPQILLVDEPTSALDDRNSL
LVEKLLLESNITLVWVTHNKDQMERLQEEERTTVVRYRDLSVNDDRVEDNFDPS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacacactgccaacagccgatggcttcaattcagtgcagacgatgaatacgaa
ccagctccagacatttcaccatcaggaatggccatcgccgccgtcccagtactatgtgtc
ttcatcctttcggcggctcttcgtcttggaaacgtgcagacgttgatcatcgctaccatc
cgatgtgttgctcagctcatgatattgggtcttattctctatccaatctttgtgaacaat
caaccatacgttgtgattccttacatcttcgtgatggtgctttttgcaatacgtgaagcc
tcagtgaaaccaaaacacagatacaagggtatgagactacacatgctcctgtcattgatg
gttggactgactacttcatttgctttcatcagtggattagtactgaaaccctttccattc
tgggatgcatcagtcatgataccagtttgcggtatgttgatgggtagctcggtcaatgct
ttgagtttaggtatggatagattgctcctatccctatctgattcggggggacgaggttcc
gcacggctgcaaacctatctagcatgtggtgcttcgagatgggaagcatctttgccctcg
atacgagaagcaattgaaacggggctaacaccaaacctcaatcaaatgtctataatgggc
ttagtatcgatacctgggatgatggcaggacaaatcctcgggggcacgtcaccattggtc
gcagcaaagtatcaaattatcatcatgttcttcatctgcagtaacagtacgttggttcta
tttggaacgatatttcaagctgtgttctataacctcttcgacaagcagcatagatttcgc
agcgagttagttagcaaacgaaagggtggcaaaccaaaggacattttactagcaatcgtt
tcttacacaggagaaaagatggggttgtacaaggatgattcagataaagctgacattggc
acgacggagagaacattctcgttaaatgacaccaagagctctacgattggcatgaagaga
ggaatgttcgaaacattcagttctacaaatacatcaacaaacgaattgcttcgtctgaga
aacggagaaatagaattcgcagatacattgcacttgtcagagctttgtctcgtgatcaac
gaaggagacttgattctcctgcaaggacccagtggatgtggcaagagtacattgctccga
ggtcttgcattgtttgaatcatttggagacagcgcaacacttgaagtcaagggtaaatcg
gccaatggcttgggtggtgcagagtattggagagctgaagtgtgctacgttcgtcagcag
ggcgggcagggattgcgtggaacaccccaggagctactccgagatcttagtgctttgcac
tctcaaaagaaacggttagaggatactgtggatacctcgaagaggttggacagacttgta
cgaaatgtacagaagaacattgagaaactggagcttcctgttgaaatgatgtctcgtcga
tgggatgaattgtccggcggtgaatctcaaagggtatacttgtgtgttctattggcttta
tgccctcagatacttctcgtagacgaaccaacatctgctcttgatgatcgcaactctttg
cttgtcgaaaagcttttgcttgaaagcaacataaccttggtttgggtaactcacaacaag
gatcagatggaaagacttcaagaggaggaacgaacaactgttgttcgctatcgagacttg
agtgtcaacgatgatcgcgtcgaagataactttgatccatcgtaa
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