Thalassiosira pseudonana: THAPSDRAFT_25729
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Entry
THAPSDRAFT_25729 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03240
translation initiation factor eIF-2B subunit epsilon
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_25729
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-2B
THAPSDRAFT_25729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LbH_EIF2B
W2
GMPPB_C
Hexapep
Hexapep_GlmU
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
7442837
NCBI-ProteinID:
XP_002294866
JGI:
25729
UniProt:
B8CFK7
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Position
22:484667..487763
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AA seq
910 aa
AA seq
DB search
MGKQSTASDPSDNKHEQKLQAVLLADTFDKAWHPVTLEAYDDGAYDVVGGTSDGASGGVG
GEGKGKERPLVLCPLNNVPLLKHTIDFLQGSGVEELFILCSNGADALESYISTHASSSSS
NKQHHNSKEYYRSNSTSNGNKIIWSSKLSITLLRFTDCTNTGDALRELDRRNIIKSDPFI
LMQGDVVTNVDVRVALASHQERKKRDNSAIMTVLLQEVGGWGLDNDDVADDGGVEEDGNL
NADNPNAPNDGYKARPNHHLPPLRSSTDDLLLALDTTKGTNDARILLWDSNPNKRNTSIP
TSFFIENSSNLTLTRNYLDIGLDICSPDVLARFSDEFDYRQLRSQFVANSVSEEEIGLQS
RIFAHFLQRGEYAGRPLGDMRRYHAVSMDVLRRWCYPLVPDNYNSCHDDHLGAGAAGGGG
KAASYVCERHFVYRDVGKRDHNQRSHVGRSTQLLGPLLLGPNNSIGEHCLLQRSTLGANC
TVMDQCSIVDCHLWRDVLVEEGAKLNGVIVCEGAIVRKGAVVERGCVIGRGCIVGEGVRL
KEFTRVTLSVEMVEEDDYSGFADSSSEEESSSEDDEDSSDDSGHEKAKPKAASSNVVSTE
RVESATSDSITNHDIVGNDGLGRVWTPSPPDEYDSDEDDDEAQAAAVDLMKSQSIGFDMT
LIYQKWQKLQMEDDDNFSEEGMGSEDEDDMDMRDEWANDANSSDNNATSSHLDDDGMQIT
GRQKGVDVVKELRDICLEHEMSSPVENLRIELNSFKFSQNATYGDCCKGAMMAVMDKVLE
KSDNPTPGKLVASLRTMLSYWGSLFQSICIGSEEEKAIIHALETMALGSGKGSVALATEP
AFRFVLQTLHDQEIVNEDAIFEWAAERKEEEKGSPRGALFWQKPTQDFLEWLEEESDNDS
DESGDDEDSD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacaatccaccgcctccgatccatccgacaacaaacacgagcaaaagctccaa
gcggtattattagccgatacgtttgataaagcatggcatcctgttactttggaggcttac
gatgacggtgcatacgatgtcgtcggtggtacctcagacggtgcatccgggggtgttgga
ggagagggcaaggggaaggaacggccgctggtgctttgtcctttgaataatgtgcctttg
ttgaagcatacgatcgatttccttcagggttcaggagtagaagagctcttcatcctctgc
agcaacggagccgacgccctcgaatcctacatttccacccacgcctcctcctcctcatcc
aacaaacaacaccacaactccaaagaatactaccgttccaattcaacttccaacggaaac
aaaataatctggtcctccaaactatctataaccctcctccgtttcacagactgtaccaat
accggagacgcactgcgtgaattagacaggaggaatattatcaagagtgatccgttcatt
ttgatgcagggtgatgttgttaccaatgtggatgtgagagtagcgttggcgagtcatcaa
gagaggaagaagagggataatagtgcgattatgacggtgttgttgcaggaggttggggga
tggggattggacaatgatgatgttgctgatgacgggggcgtggaagaggatgggaatttg
aatgcagataatccaaatgctccaaatgatgggtacaaggcacgaccgaatcatcatttg
cctcctctacgatcatctacggatgatttactgctagcactcgacacaaccaaaggaacg
aacgatgcacgtatcctcctatgggattccaatccaaacaaacgaaatacctccatcccc
acctcctttttcatcgagaactcgtccaacctcaccctaactcgcaactacctcgacatt
ggactcgacatttgctcacccgacgtattagcccgcttctccgacgaatttgactaccgt
caactacgctctcaattcgtcgcgaactcggtctctgaagaagagatcggactgcagtct
cgcatctttgcgcattttttgcaaaggggagagtatgcaggaaggccattgggggatatg
aggcgataccacgctgttagtatggatgtgttgaggaggtggtgttaccctttggttccg
gataattacaatagttgtcatgatgatcatttgggtgcgggggctgcgggagggggagga
aaggcggcgagttatgtgtgtgagcgacactttgtgtatcgggatgtggggaagagggat
cacaatcaacgatcgcatgtggggagatcaactcaattattgggaccgttgttgttgggt
ccaaacaactccattggagagcactgtcttttgcaacgatctaccttgggggcaaactgc
acagtgatggatcagtgttccattgtagattgtcacttgtggcgtgatgttttggtggag
gagggagctaaattgaacggagttattgtatgtgagggagctattgtgaggaagggggca
gtggtggagcgaggatgcgtcattggaaggggatgcatcgttggtgaaggtgtaaggttg
aaggagtttacgagggttactctttctgtggaaatggtggaagaagatgactacagcggt
ttcgctgacagcagtagcgaggaggaatcatcctcggaggacgacgaggatagcagtgac
gacagcggacacgagaaagccaaacccaaagctgcatccagcaatgttgtttcgaccgaa
agagtggagagtgccacttctgacagcataaccaatcacgatatcgtcggcaatgacgga
ttgggacgagtatggactccttcacctccagatgagtacgattctgacgaagacgacgat
gaggctcaagcggcagcagtagatttgatgaagtctcaaagcattggatttgatatgact
ttgatctatcagaaatggcagaagcttcaaatggaggacgatgacaactttagtgaggag
ggaatgggtagtgaagacgaagacgatatggacatgagagacgagtgggccaatgatgct
aactcaagcgacaacaatgccacctcttcccatcttgatgacgatgggatgcaaatcact
ggaagacaaaagggagtggatgttgtcaaggaactgcgtgacatttgtcttgagcatgaa
atgtccagtcctgtggagaatctcaggattgaattgaactccttcaagttcagtcagaat
gccacatacggagactgctgcaagggagccatgatggcagtaatggataaagtcctcgag
aaatcggacaatccaacacctggaaagctagttgcctcgcttcgaacaatgttgagttat
tggggatctttgtttcaatccatttgtatcggctctgaggaagaaaaggcaatcattcac
gctttggagacaatggcgctgggatcgggaaagggatctgtagccttggcgacagaaccg
gcgtttcggtttgtcttgcagacactgcacgatcaggagattgtgaacgaggatgctatc
tttgaatgggcagccgagagaaaagaggaggagaagggcagccctcgaggtgctttgttc
tggcaaaagccaactcaagactttcttgaatggttggaggaagagagtgataatgatagt
gatgaaagtggggacgacgaggacagcgattga
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