KEGG   Thalassiosira pseudonana: THAPSDRAFT_268238
Entry
THAPSDRAFT_268238 CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_268238
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_268238
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    THAPSDRAFT_268238
 Prokaryotic type
    THAPSDRAFT_268238
Chromosome and associated proteins [BR:tps03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    THAPSDRAFT_268238
SSDB
Motif
Pfam: GIDA SAM_GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox_2 FAD_binding_2 HI0933_like AlaDh_PNT_C Pyr_redox_3 FAD_binding_3 Pyr_redox
Other DBs
NCBI-GeneID: 7446520
NCBI-ProteinID: XP_002287776
JGI: 268238
UniProt: B8BU46
LinkDB
Position
2:complement(798596..801165)
AA seq 769 aa
MKSNTISSGEVAFVSKKNKHISINNHRQSQKHNLHHLLLTLSIIAITNMRFALAFSQRGL
MPSFNKLVTHQHTEIASSYVQQTTRLQSTSSSKSYDVIIVGGGHAGTEAATASARTGART
LLLTQNKSTLGELSCNPSIGGIGKGHLVREIDALQGVMGEVADGSGIHFRMLNRRKGPAV
RGPRGQMDRDLYKKNMQDLLLNGVELGINGIENLDVMEASAEDLLLDEGDAIETLAPLAD
RVEIESTTVVLTTGTFLRGVLMIGHERYSGGRHLRDSEEVEPPSVGLALTLERFGFPLGR
LKTGTPARLDGRTIDWDGCNIQPSERPAIPFSHIRQSRGEEPPLAASGNLIDCYQTATNE
ATHRLVMDYAHLLPQYDGMDGKGNGPRYCPSIFKKVERFAERNSHNSFLEPEGLNTHIVY
PNGMSGPYPEEIQLQIFRSMKGLEKVEIVRPGYDVEYDFVNPTALTHTLETKSIAGLYLA
GQICGTTGYEEAGAQGVIAGANAGRAAGAAYRGEKPPLPFVLGRDEAYIGVLIDDLVTKG
TLEPYRMFTSRAEYRISLRADNADIRLTRKGAEHGLVTDPERLAALDMRENLIADNVERL
RNFKLFVTDWANRGGNDLMGGAAATRQGRESHKKSAEEVLGMPHVTLEDVEKIMADYEMN
PTPSSVYDTVEASVKYKSYVVRQEKDIESWRKAQGARIPPNIIYEHSIMPTFSKEEIEKL
NRFKPTTFAEASQISGLTPQSLVYLYHHVMKLNKETKRKERAEAESTAL
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgaagtccaatactatctccagcggcgaagttgcctttgtttccaagaagaataaacac
atcagcatcaacaatcatcgtcagtcacaaaagcacaacttgcaccatctactcctcacc
ctgtccatcattgccataacaaacatgagatttgcattagccttctctcaacgaggactg
atgccctccttcaacaaactcgtgactcatcagcacactgaaatcgcatcatcatacgtc
caacaaaccacccgtctccaatccacatcctcgtctaaatcatatgacgtaatcatcgtt
ggaggaggccacgctggtaccgaagcagccacagcctctgcgcgaacaggcgcccgaact
ctcctcctaacccaaaacaaatccactctcggagaactatcgtgcaacccctccatcgga
ggcataggcaaaggacaccttgtacgtgaaatagatgcactccaaggagtaatgggcgaa
gtagccgatggaagtggaatccattttagaatgttgaatcgtagaaaaggaccggcggta
cgcggtccacgagggcagatggatcgtgatttgtacaagaagaatatgcaggatttgtta
ttgaatggagtggaacttggtatcaatggtattgagaatttggatgtgatggaggcgagt
gcggaagatttactgttggatgagggcgatgcgatcgagacacttgctcctttggcggac
cgggttgagattgaatctactaccgtggtgttgacgactggaacatttcttcgtggggta
ctaatgattggtcatgaacgatacagtggtggaaggcatttgcgtgattcagaagaagtg
gaaccacccagtgttggcctcgcacttacgttggaacgatttggtttccccttgggaagg
ctcaagactggaactcccgctcgattagatgggagaacaattgattgggatggatgcaac
atccaaccaagtgagagacctgccattcctttttctcatattcgacaatcacgtggggag
gaaccgccgcttgctgcctcaggcaacttaattgattgctaccaaactgccactaatgaa
gcgactcacaggttggtgatggattatgcgcatttgctgccacaatacgatggaatggat
ggcaaagggaacggaccgaggtattgccccagtattttcaagaaggtggaacgatttgct
gagagaaatagccacaactccttcttggagccggaggggttgaacactcacattgtctat
cctaatggtatgagtggtccttatcccgaagagatacagctgcaaatatttcgatcaatg
aaggggttggagaaagttgaaatcgtcaggcctggatacgatgttgaatatgactttgtc
aaccccacagcactgacgcatacgcttgaaaccaaatcaattgctggtttatacctcgca
ggacaaatctgcggtactactggatacgaagaagcgggcgctcaaggagtcatcgcgggt
gccaacgctggccgtgcagccggagcagcttatcgtggagaaaagcctccattgccgttt
gttttgggaagagacgaagcttacattggtgtgttgattgatgacttggtcaccaaagga
acattggagccgtatagaatgtttacttccagagcagagtacagaattagtttgagagct
gacaatgctgatattcggcttacgagaaagggtgccgagcacgggcttgtgaccgatcca
gaaaggttggctgcattggatatgcgggagaatttgatagctgacaatgttgagagactg
cgcaacttcaagctctttgtaactgactgggcaaacagaggaggaaacgatcttatggga
ggtgctgctgccactcgtcaaggcagagaaagtcacaagaagagtgccgaggaagtgctg
ggtatgcctcatgttacgttggaggatgttgagaagatcatggcagattacgaaatgaat
ccaacaccatcgtcggtctatgatactgtcgaggcatcagtgaagtataaatcatacgtc
gttcgacaagagaaggatattgaaagctggcgaaaagcacaaggggcgagaataccacca
aatattatttacgagcactcgattatgcccacgttcagcaaagaggagattgaaaagttg
aataggttcaagcctacgacctttgcagaagcatcgcaaattagtggattgacgccacag
tcattggtgtatttgtatcatcatgtaatgaaattgaacaaggagacgaagagaaaagaa
cgtgccgaagccgaaagtacggcattatga

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