Thalassiosira pseudonana: THAPSDRAFT_268238
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Entry
THAPSDRAFT_268238 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_268238
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_268238
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
THAPSDRAFT_268238
Prokaryotic type
THAPSDRAFT_268238
Chromosome and associated proteins [BR:
tps03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
THAPSDRAFT_268238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
HI0933_like
AlaDh_PNT_C
Pyr_redox_3
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
7446520
NCBI-ProteinID:
XP_002287776
JGI:
268238
UniProt:
B8BU46
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All DBs
Position
2:complement(798596..801165)
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AA seq
769 aa
AA seq
DB search
MKSNTISSGEVAFVSKKNKHISINNHRQSQKHNLHHLLLTLSIIAITNMRFALAFSQRGL
MPSFNKLVTHQHTEIASSYVQQTTRLQSTSSSKSYDVIIVGGGHAGTEAATASARTGART
LLLTQNKSTLGELSCNPSIGGIGKGHLVREIDALQGVMGEVADGSGIHFRMLNRRKGPAV
RGPRGQMDRDLYKKNMQDLLLNGVELGINGIENLDVMEASAEDLLLDEGDAIETLAPLAD
RVEIESTTVVLTTGTFLRGVLMIGHERYSGGRHLRDSEEVEPPSVGLALTLERFGFPLGR
LKTGTPARLDGRTIDWDGCNIQPSERPAIPFSHIRQSRGEEPPLAASGNLIDCYQTATNE
ATHRLVMDYAHLLPQYDGMDGKGNGPRYCPSIFKKVERFAERNSHNSFLEPEGLNTHIVY
PNGMSGPYPEEIQLQIFRSMKGLEKVEIVRPGYDVEYDFVNPTALTHTLETKSIAGLYLA
GQICGTTGYEEAGAQGVIAGANAGRAAGAAYRGEKPPLPFVLGRDEAYIGVLIDDLVTKG
TLEPYRMFTSRAEYRISLRADNADIRLTRKGAEHGLVTDPERLAALDMRENLIADNVERL
RNFKLFVTDWANRGGNDLMGGAAATRQGRESHKKSAEEVLGMPHVTLEDVEKIMADYEMN
PTPSSVYDTVEASVKYKSYVVRQEKDIESWRKAQGARIPPNIIYEHSIMPTFSKEEIEKL
NRFKPTTFAEASQISGLTPQSLVYLYHHVMKLNKETKRKERAEAESTAL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatactatctccagcggcgaagttgcctttgtttccaagaagaataaacac
atcagcatcaacaatcatcgtcagtcacaaaagcacaacttgcaccatctactcctcacc
ctgtccatcattgccataacaaacatgagatttgcattagccttctctcaacgaggactg
atgccctccttcaacaaactcgtgactcatcagcacactgaaatcgcatcatcatacgtc
caacaaaccacccgtctccaatccacatcctcgtctaaatcatatgacgtaatcatcgtt
ggaggaggccacgctggtaccgaagcagccacagcctctgcgcgaacaggcgcccgaact
ctcctcctaacccaaaacaaatccactctcggagaactatcgtgcaacccctccatcgga
ggcataggcaaaggacaccttgtacgtgaaatagatgcactccaaggagtaatgggcgaa
gtagccgatggaagtggaatccattttagaatgttgaatcgtagaaaaggaccggcggta
cgcggtccacgagggcagatggatcgtgatttgtacaagaagaatatgcaggatttgtta
ttgaatggagtggaacttggtatcaatggtattgagaatttggatgtgatggaggcgagt
gcggaagatttactgttggatgagggcgatgcgatcgagacacttgctcctttggcggac
cgggttgagattgaatctactaccgtggtgttgacgactggaacatttcttcgtggggta
ctaatgattggtcatgaacgatacagtggtggaaggcatttgcgtgattcagaagaagtg
gaaccacccagtgttggcctcgcacttacgttggaacgatttggtttccccttgggaagg
ctcaagactggaactcccgctcgattagatgggagaacaattgattgggatggatgcaac
atccaaccaagtgagagacctgccattcctttttctcatattcgacaatcacgtggggag
gaaccgccgcttgctgcctcaggcaacttaattgattgctaccaaactgccactaatgaa
gcgactcacaggttggtgatggattatgcgcatttgctgccacaatacgatggaatggat
ggcaaagggaacggaccgaggtattgccccagtattttcaagaaggtggaacgatttgct
gagagaaatagccacaactccttcttggagccggaggggttgaacactcacattgtctat
cctaatggtatgagtggtccttatcccgaagagatacagctgcaaatatttcgatcaatg
aaggggttggagaaagttgaaatcgtcaggcctggatacgatgttgaatatgactttgtc
aaccccacagcactgacgcatacgcttgaaaccaaatcaattgctggtttatacctcgca
ggacaaatctgcggtactactggatacgaagaagcgggcgctcaaggagtcatcgcgggt
gccaacgctggccgtgcagccggagcagcttatcgtggagaaaagcctccattgccgttt
gttttgggaagagacgaagcttacattggtgtgttgattgatgacttggtcaccaaagga
acattggagccgtatagaatgtttacttccagagcagagtacagaattagtttgagagct
gacaatgctgatattcggcttacgagaaagggtgccgagcacgggcttgtgaccgatcca
gaaaggttggctgcattggatatgcgggagaatttgatagctgacaatgttgagagactg
cgcaacttcaagctctttgtaactgactgggcaaacagaggaggaaacgatcttatggga
ggtgctgctgccactcgtcaaggcagagaaagtcacaagaagagtgccgaggaagtgctg
ggtatgcctcatgttacgttggaggatgttgagaagatcatggcagattacgaaatgaat
ccaacaccatcgtcggtctatgatactgtcgaggcatcagtgaagtataaatcatacgtc
gttcgacaagagaaggatattgaaagctggcgaaaagcacaaggggcgagaataccacca
aatattatttacgagcactcgattatgcccacgttcagcaaagaggagattgaaaagttg
aataggttcaagcctacgacctttgcagaagcatcgcaaattagtggattgacgccacag
tcattggtgtatttgtatcatcatgtaatgaaattgaacaaggagacgaagagaaaagaa
cgtgccgaagccgaaagtacggcattatga
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