Thalassiosira pseudonana: THAPSDRAFT_268366
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Entry
THAPSDRAFT_268366 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00520
Amino sugar and nucleotide sugar metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
THAPSDRAFT_268366
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
THAPSDRAFT_268366
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GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
7452356
NCBI-ProteinID:
XP_002288035
JGI:
268366
UniProt:
B8BVK8
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Position
2:complement(2082322..2084912)
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AA seq
570 aa
AA seq
DB search
MARIHKRWPTSPLSSSLPLLPTTAARALLLSCTVALLLLPTSCAWEKAIHSHDKTIIAYY
ASWQWYDRSGLAKPANLDYSKITRINFAFFQPTIHGDIYGTDNWADPNVLFGAYDWNAIP
GGANEYCSWDAAGEPPVCAGHQYETGLIYLSHSNGVEVYPSIGGWTLSDNFPTLAANEAL
PCGPDLIDKIQVDVVADILTELNLMTYDFHGMFNAPLYDMEGSPDFSVHGCVQNWMKAGG
RGDQINIGLPFYGRSFAGSGLTGLGQVHSGAGDMITWSDDEGTPQYFNIVNKISQFTSVR
DEQTHTQIAYNSAGLVSYDDERAICDKTEYAMDHNLNGYIIWEISGDILPDLSTPLLDAT
NDRLNNPNIKSGASPSKNDSPPPDYNGKWYPQAGSCLQSDGTIPDWIKEADLFNHEDECC
KEHYAFSSSCGSGPVVEITTKPTPNPTNKPFYQPMDGVGDARFYPFYGNDGTSVECRNTV
VYPKVPNWISENMLKLSRYDCCSTYFFQEKLQQCEANKYPFYPDFESISCLSDGEHPAYM
GGEYLQGNKWQCCDNFFSHDKALLATCKDQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatacacaagagatggccgacatcgccattgtcgtcgtcgcttcccctcctt
cctacaacagcagctcgcgccctcctcctatcgtgcacagtagccctcctccttcttcca
acttcgtgtgcttgggaaaaggccatccattcccatgataagacaatcattgcctattat
gcatcgtggcagtggtatgatcgcagtggactcgccaagccagcgaatctcgactacagc
aaaatcactcgtattaactttgcattcttccaaccgacaatccatggagacatctatggc
acggataattgggcggatccaaacgttttgttcggtgcctacgattggaatgccattcca
ggaggcgctaacgagtattgttcatgggatgcagcaggagaaccgcccgtttgtgcgggg
caccagtacgagactggattgatctacctttctcattctaacggggtggaagtgtatcct
tccatcgggggatggacgctgagtgacaactttccaacgttggcggcgaatgaagccttg
ccttgtggtcccgatttgatcgataaaatccaagtagatgtggtcgcagatatcctcacg
gaactcaacttgatgacgtatgattttcatggtatgttcaatgctcccctttacgacatg
gaaggatctcccgacttttctgttcacggctgtgttcaaaactggatgaaggctggtgga
cgaggtgatcaaattaacattggattgccgttttacggccgtagttttgctggatcgggg
ttgactgggttaggccaagtgcattccggagcgggggacatgattacgtggtcggacgat
gagggaacgcctcagtacttcaatatcgtcaataagatctcgcagtttacaagcgtgaga
gatgaacagacccatacacagattgcttacaacagtgctggtttggtatcctacgatgat
gaacgtgctatttgcgataagactgagtatgcgatggatcacaatctcaatgggtacatt
atttgggagatcagcggagacattctgcccgatttgagcactcctctgttagatgctacc
aatgatcggctaaataacccgaatataaaatctggcgcttcaccgagtaagaatgacagt
cctcctccagactacaacggcaaatggtatcctcaagctggaagctgtctccaatcggat
ggcacgattccagattggatcaaggaggctgatttgtttaatcacgaggatgaatgctgc
aaagagcactacgccttttcatcaagctgtggctctggccctgtcgttgagatcacaacc
aagccgaccccgaaccctactaacaaacccttctatcaaccaatggacggtgtcggcgac
gctcgcttctaccccttctatggcaatgacggaaccagtgttgaatgccgaaacactgtt
gtttaccccaaggtacccaattggatatcagaaaatatgctcaagttgagccgctatgac
tgttgttcgacctacttctttcaagaaaagttgcaacagtgtgaagcgaacaagtatccg
ttctatcctgactttgaatcaatatcatgtctaagtgacggggagcatccagcttacatg
ggtggagagtatcttcaaggaaacaagtggcagtgctgcgataacttcttttcgcacgat
aaggccttgcttgctacgtgcaaagatcagtag
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