Thalassiosira pseudonana: THAPSDRAFT_2791
Help
Entry
THAPSDRAFT_2791 CDS
T01078
Name
(RefSeq) predicted protein
KO
K19730
autophagy-related protein 101
Organism
tps
Thalassiosira pseudonana
Pathway
tps04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
THAPSDRAFT_2791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_2791
Membrane trafficking [BR:
tps04131
]
Autophagy
Autophagosome formation proteins
ULK complex
THAPSDRAFT_2791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG101
Motif
Other DBs
NCBI-GeneID:
7452313
NCBI-ProteinID:
XP_002287468
JGI:
2791
UniProt:
B8BVC8
LinkDB
All DBs
Position
2:1847978..1848843
Genome browser
AA seq
227 aa
AA seq
DB search
MNCQVHQLPEFESATSHVREALQAILHTILFIRSPGQVAPYDVQCESFDTTYTRIATDND
PPPTLHQSRQHHNQQPTNLLKSDLDRKVDDSIETFLQTLSPIGPELMAGCLTLSFFERRA
KNKLFGLVHQEEKVVWEQWVLRVVVNNTPRPMGGDEASIIERQRIQDTAEGMLKAVLFKV
FDLAGSEIDHIPPVMYDFEIANTKKADDRDEVYSRVSTMPALLNLGS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaattgccaagtgcaccaactaccagaatttgagagcgctacgtcccacgttcgtgaa
gcactccaggcaatactccatacaatcctcttcattcgcagtccaggtcaggtggctccg
tatgatgtccagtgtgagagctttgatacaacctatactcggatagctacagacaatgac
ccgccaccaactctacatcaaagtagacaacatcacaatcaacaaccaaccaatctcctg
aaaagcgatctagaccgcaaagtagacgattccatagaaacgtttctccaaacactctcg
ccaataggccccgagcttatggctggatgtttgacactctccttctttgaaagacgggca
aagaataaactttttggattggttcatcaggaagagaaggttgtgtgggaacagtgggtg
ctgagagtcgtggttaacaatactccgaggcccatggggggagatgaagcgagtattatc
gaaaggcagaggattcaggacaccgctgagggaatgctcaaggctgtgctattcaaagtg
ttcgatctcgctggaagtgaaatcgatcacattccacccgtgatgtatgatttcgagatt
gccaatacgaagaaagcggatgatagagatgaagtctattcgagagtttctactatgcca
gctcttctaaaccttgggtcgtaa
DBGET
integrated database retrieval system
