Thalassiosira pseudonana: THAPSDRAFT_33685
Help
Entry
THAPSDRAFT_33685 CDS
T01078
Symbol
MCM1
Name
(RefSeq) probable methylmalonyl-coa mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00280
Valine, leucine and isoleucine degradation
tps00630
Glyoxylate and dicarboxylate metabolism
tps00640
Propanoate metabolism
tps01100
Metabolic pathways
tps01200
Carbon metabolism
tps04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THAPSDRAFT_33685 (MCM1)
00640 Propanoate metabolism
THAPSDRAFT_33685 (MCM1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
THAPSDRAFT_33685 (MCM1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
THAPSDRAFT_33685 (MCM1)
Enzymes [BR:
tps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
THAPSDRAFT_33685 (MCM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Motif
Other DBs
NCBI-GeneID:
7443705
NCBI-ProteinID:
XP_002289878
JGI:
33685
UniProt:
B8BZW3
LinkDB
All DBs
Position
4:complement(1562152..1564376)
Genome browser
AA seq
713 aa
AA seq
DB search
MKHISTLHTKGVKPYERGPYATMYTNRPWTVRQYAGFSTAEESNKFYRANVAAGQQGLSV
AFDLPTHRGYDSDHPRVVGDVGMAGVSIDSVEDMKVLFDGIPLDQISVSMTMNGAVLPTM
AMYVQAAIEQQEAIGNESKFREGGGGEDKPSVLSSLRGTIQNDILKEFMVRNTYIYPPKP
SMDRVVADIIGFCASHMSKFNTVSISGYHMQEAGADAALELGFTIADGLEYIRTAVERAG
LKVDDVAPRYSFFFGIGMNYYMEIAKLRAARRLWSTLVEQHFQPKDPRSLLLRTHCQTSG
YTLTEQQPLNNVIRTTIEALAAVQGGTQSLHTNSYDEAIGLPTVQTARVARNTQLILQEE
AGVCDVADPWGGSYMMESLTDELAEKAMAIIDEVEEAGGMTAYINSGMAKLRIEESATKK
QGRIDSGQDIIVGVNKYRLDAKDEQEERQEVLQIDNSAVREKQIGRLNELKARRNNDEVK
AALDALEASAKKNVSTSKGDNENNLMALCIEAARVRCTLGEISLALENAWDRHVPSSTIV
QGAYGASFTNSTTNKDNESEYDHVLNEVKKFEEKEGRRPRILVAKMGQDGHDRGAKVIAS
GFSDLGFDVDIGPLFQTPEEVALQALDSDVHVIGISSQAAGHKTLLPALRAELTKRGADN
IVIVAGGVIPPQDYDFLMNESKCCSAVFGPGTRITDAALGTLRLIEQSTEGCT
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacatctccactctccacaccaagggcgtcaaaccatacgaacgaggtccatat
gcaacaatgtataccaacagaccgtggacagttcgccagtatgctggattctcaactgca
gaagaaagtaacaagttctatagggcaaacgtagctgcagggcaacagggactatcagta
gcatttgatcttcctactcatcggggttatgattcggatcatcctcgtgtcgttggagac
gtaggaatggcaggagtgtcaattgattcagtagaagatatgaaggtactgtttgacggt
atccctttggatcagatctcggtttcaatgactatgaatggagcagtactgcctacaatg
gcaatgtatgtacaggcagcgattgaacagcaagaagcgattggaaatgaatcaaagttt
cgtgaaggaggaggtggcgaggacaagccatctgttctatcttcacttcgtggtactatt
caaaatgatatcttgaaagagtttatggtacgaaacacgtacatctatcctcccaagcca
tcaatggacagagttgttgcagacatcattggattctgtgcaagtcacatgtcaaagttc
aacactgtcagtatcagcggttatcatatgcaggaggctggagccgatgctgcacttgag
cttggatttacaattgcagatggattggagtacattcgtactgcggtagaacgtgctgga
ttgaaggtagacgacgttgctccgaggtatagcttcttctttggtattggaatgaactac
tatatggagattgcaaagcttcgagcggcacgtcgtctgtggtccaccttggttgaacag
cacttccaaccaaaggatccacgttcactccttctgcgaacgcactgtcagacttctgga
tacactctcactgaacagcaaccactcaataacgtcatacgaacaacaatagaagcactt
gctgcggtacaaggaggcactcagagtcttcatacaaactcctacgatgaagcaattggt
cttccaacggtacaaacggctcgagttgctcgcaatacacagctcattctgcaggaagag
gctggagtatgtgatgtcgctgatccatggggtggatcatacatgatggaaagcttgaca
gacgaactagcagagaaagccatggcaatcattgacgaagtggaggaggcaggtggaatg
acggcatacatcaacagtggaatggctaagcttcgtatcgaagaaagtgcgacaaagaag
caaggtcgtattgattctgggcaagacatcattgtgggagtgaacaagtaccgactggac
gcaaaagatgaacaagaagagcgacaagaagtacttcagattgacaatagtgcagtgagg
gagaagcagattggtcgtctcaacgagttgaaggcacgaagaaacaatgatgaagtcaaa
gctgcactagatgctctcgaagcaagtgcaaagaagaatgtcagtacgagtaagggtgac
aatgaaaacaacttgatggctttatgcatagaagcagcacgagtgaggtgtactctcggg
gagatatcactggctcttgagaatgcatgggatcgtcacgtaccttcatcaaccatcgtg
caaggagcgtatggagcgtcctttacgaactcaacaacaaacaaagacaacgagtcagag
tatgaccatgtactaaacgaggtgaagaagtttgaagagaaagaaggacgcagaccacgt
atcctagtagcaaagatggggcaagacggtcacgatcgaggagccaaagtcattgccagt
ggattctcggacttgggcttcgatgttgacattggtcctctattccaaacaccggaagaa
gtggcattgcaagcattggactcggacgtgcacgtcattggcatctcgtcacaagcagct
ggacacaagactcttcttcccgcattgagagctgagctgacaaagagaggagctgataac
attgtcattgttgcgggtggagtcattcctccacaggattatgactttctcatgaacgag
tcaaagtgttgttctgctgtatttggccctggaacgcgaatcacggatgctgcgttgggt
acacttcgtttgattgaacaaagtaccgagggttgtacttga
DBGET
integrated database retrieval system
