Thalassiosira pseudonana: THAPSDRAFT_39824
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Entry
THAPSDRAFT_39824 CDS
T01078
Symbol
HSP104
Name
(RefSeq) member of the HSP104/clp superfamily
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tps03110
]
THAPSDRAFT_39824 (HSP104)
Chaperones and folding catalysts [BR:
tps03110
]
Heat shock proteins
HSP100
THAPSDRAFT_39824 (HSP104)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Clp_N
AAA_22
Sigma54_activat
AAA_7
TniB
ATPase_2
bpMoxR
nSTAND3
AAA_14
Mg_chelatase
AAA_18
RuvB_N
Roc
Zeta_toxin
IstB_IS21
ABC_tran
AAA_25
AAA_19
AAA_30
T2SSE
DUF87
Spore_III_AA
Motif
Other DBs
NCBI-GeneID:
7444697
NCBI-ProteinID:
XP_002288245
JGI:
39824
UniProt:
B8BXB9
LinkDB
All DBs
Position
3:563979..566862
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AA seq
926 aa
AA seq
DB search
MTDRTMTDATTKAIEQCLSIARDNGHALAEPIHLAAALFADDESIGSRVVAKADAGSNNT
TSYQQQQQQDLIDVRQVRQAIQRAILKKPTQSPPPHEASISTSLQKVIQRAISSAKANGD
SLVALDHLLVAIYDDKTTKDTLESAGLSKKIATKATEEIRGGRKVTSASAEESYEALEKY
GIDLVKAADEGKLDPVIGRDEEIRRIIQILCRRTKNNPCLVGEPGTGKTAIVEGLAKRIL
DGDVPLTLKDVALRTLDMGALVAGAKYRGEFEERLRAVLDECKKANGRIILFVDEVHLVL
GAGKSDGAMDAANLLKPMLARGELRMIGATTLEEYRQHIEKDAAFERRFQKVQVNEPSVE
ATISILRGLSDKYEAHHGVRISDAALITAAQLSDRYITGRFQPDKSIDLLDEAAATRRVQ
LDSRPEKIDVLERKIMQLEIEATALGREKDKASKKRRKEVQAEVANLREELEPLLEKWEA
DRGRADELKDAKEKLAGLEAKAAAAERVGNYEKAADLKYGAIPDLRSHIAKIVKEEEERK
EEQSEKNDDDDSLALEVVLPKHITEIISRWTGIPANKLSQTERERLLHLGDRLKERVVGQ
DGAVDEVTDCILRSKAGLSRPSQPDGSFLFLGPTGVGKTELARAIFSELYDEDERHLVRI
DMSEYTEPHSVARLVGAPPGYIGHDEGGQLTEAVRRKPYTVVLFDEVEKAHKQVLTVLLQ
VLDEGRLTDSKGRTVDFTNTVIILTSNLGASALLDYDESSDESRDLARAKVMSAVRSHFS
PEFLNRLSGVVMFNSLGASQLEKICQKAMKGVKKRLAGQGIRVVLEKSGTEAILDASYDR
SYGARPVERYLEQTVVTKLSKMLIAGEIANGYTVFIEGISDDDSFEIVEPAKKRAKTLSY
RVEKFPADMVLNEEGELVPESVPMQT
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagaacaatgaccgacgcaaccactaaggcaatcgagcagtgtctctccatc
gctcgtgacaacggccacgccttggccgaacccatccatctcgctgctgctctctttgcc
gacgatgagtccattggatccagagtcgttgccaaagccgacgcaggcagtaacaatacc
acatcctaccaacagcagcaacaacaagatttgattgacgtacgtcaagttcgtcaagct
attcaacgtgccatcttaaagaagcctacgcaaagcccaccaccacacgaggctagtatt
tcaacatcccttcaaaaggtgatccagcgtgcaatatcatctgcaaaagccaacggagat
agtcttgtggctttggatcatttacttgttgccatctacgatgacaagactacaaaagat
acgttggagagcgctggactctcaaagaagattgccaccaaggcaacagaggagattaga
ggaggacgaaaagtgacatctgcatccgccgaggaatcgtacgaggcattggagaagtac
ggtattgatcttgtcaaggcagcagatgagggcaagcttgatccggtgattggacgtgac
gaagaaatccgtcgcatcatacaaatactctgccgtcgtactaagaacaacccatgttta
gtcggtgagccagggacgggaaagactgccattgtcgagggattggcaaagcgtatcttg
gacggtgacgtaccgctcacattgaaagatgtcgctcttcgtacacttgacatgggagcc
ttggtggcaggagccaagtaccgtggagaatttgaggagagattgcgggcagtattagac
gagtgcaaaaaggctaatggaaggatcatcctctttgtggatgaggtgcatctcgttctt
ggagctgggaaatcagatggagcaatggatgctgccaatctactcaaacctatgttggct
cgtggtgagctaaggatgattggagccacgacacttgaggagtatcgacaacacattgag
aaggatgctgcgtttgaacgtcgtttccaaaaggtacaagtcaatgagccgtctgtggaa
gcaacaatcagtattcttcgtggactctccgacaagtacgaggcccatcacggagtacga
atctcagatgcggctctcattactgctgctcagctctcagatcgatatatcactgggcgt
tttcaaccggacaagtctatagatttgcttgatgaagcagcggctacccgtcgtgtccaa
ttggacagtcgtcctgaaaagattgacgtccttgagcgcaagatcatgcagttggagatt
gaggcgactgccttgggaagagagaaggataaggcatctaaaaagagacgcaaggaagta
caagccgaagttgccaatctacgcgaggagttggaaccattgcttgaaaagtgggaggca
gaccgtggacgtgccgacgagctcaaggatgcaaaagagaagctcgctggtttggaggcc
aaagcagctgctgccgagagggtgggcaactacgaaaaggctgctgatctgaaatatgga
gccatacctgatcttagatctcacattgcaaagattgtcaaggaagaggaggaacgcaaa
gaagaacaatccgaaaaaaatgatgatgatgactcgctagcactggaggtagtcttgccg
aagcacattactgaaatcatcagcagatggacaggtattccagcaaacaaattgtctcag
acagaaagggaacgtcttcttcatcttggtgatcgcttgaaggaacgtgtcgttggacaa
gacggtgcagtggacgaagtgactgactgtatcttacgatccaaggctggtctttctaga
ccttctcaacctgatggctcgttcttgttccttggccctaccggcgtcggcaagacggag
cttgctcgtgccatctttagcgagctctacgatgaagacgaacgtcatcttgttaggatt
gacatgtcggaatacactgagccacactcggttgcacgtcttgtgggtgcacctccggga
tacattgggcacgacgaaggaggacagttgacggaggcagtgaggagaaagccgtatact
gtggtgctctttgacgaggtggagaaagcacacaaacaagtgctcacggtgctgttacaa
gtccttgacgaaggaaggttgactgatagcaaagggcgaactgtggactttaccaacaca
gtcattattctaacttccaacttgggtgcgtctgcactattggattacgatgagtcatct
gatgagtcaagagatcttgccagagccaaagttatgtcggcagtgcgatctcacttctct
ccagagttcctcaacaggctctcgggagtggtaatgttcaactccttgggagcttctcag
ttggagaagatttgccaaaaggcaatgaagggagtcaagaagagactcgctggacaaggc
attcgtgtagtgctggagaagagtggaacggaagccattttggatgcaagctacgaccgc
agttacggagctcgtcctgtagagaggtacttggagcagaccgtcgttacgaagctaagc
aagatgctcattgctggcgagattgccaacggatatacagtcttcatcgaaggtattagt
gatgacgattcctttgagattgtggagccggcaaagaagagagccaagaccttgtcgtac
agagtagagaagttcccagcagatatggtattgaacgaggaaggagagttggttcctgaa
tccgttccgatgcagacttag
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