Thalassiosira pseudonana: THAPSDRAFT_42646
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Entry
THAPSDRAFT_42646 CDS
T01078
Name
(RefSeq) topoisomerase
KO
K10878
meiotic recombination protein SPO11
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_42646
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
THAPSDRAFT_42646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
7444204
NCBI-ProteinID:
XP_002294481
JGI:
42646
UniProt:
B8CE39
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Position
17:complement(287314..288882)
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AA seq
352 aa
AA seq
DB search
MNTTQVMEGIENVAVKIAKQVLAKQGFQLEIPSRSASNQVYVPELDRIVLGDKTGTRSFL
NVKESRKSAITTRVLQLLHAVLLKRIHITKRDLFYTDVKLFVDQSESDGVLDDVATMIGC
TRSNLHVVASDKGLVVGRISFFEDGDFIDCTKMGVGGKAIPPYIDKIENIQSDAEFILLV
EKEAAYMRMAEDRFYQRYPCIVITAKGQPDVATRMFLSRITSELQIPVLALVDSDPYGLK
ILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLNRYDLPDQCRLNMTENDIKTGKELLQ
EAFIMKNPKWMKELQIMVKTKQKAEIQALSSFGFQYITEVYLPRKLKEGDWI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacactacgcaggtaatggagggtattgagaatgtagctgtcaagattgcaaagcag
gtgctcgcaaaacagggatttcagcttgagattcccagcagatcagcttcaaaccaagtg
tatgtgccggagttggatcggattgtcttgggagacaagacgggcacgaggagcttcttg
aatgtcaaggagtcacgcaaatctgctatcacaactcgcgtccttcagcttcttcatgcc
gttctcttgaaacgcatccacatcaccaaacgtgacctcttttacacagatgtcaagctt
tttgtagaccagagtgaaagtgatggagtgttggacgacgttgcaacaatgattgggtgt
acgaggtcgaatcttcacgtcgtagctagtgacaaaggtcttgttgttggacgcatttcg
ttctttgaggacggggatttcattgattgcacaaagatgggagttggaggcaaggcgatc
cctccttacattgataagattgagaacattcagagtgatgcagagtttattctgctggtg
gagaaggaagctgcttacatgagaatggcggaggataggttctatcaacgttacccttgc
attgtcataactgccaaaggtcaaccggatgtggcgacgcgtatgtttctctctcgtatc
acgtccgagttgcagatacctgtgttggcattggtggactcggatccgtacggcctaaaa
atactatctgtttacatgtccggtagtaagaacatgtcgtatgacagtgccagtttgact
actccagatatcaaatggctgggattgcgtccgagtgatttgaacagatacgatcttcct
gaccagtgtcgtttgaacatgaccgagaatgatatcaagactggcaaggagttgcttcag
gaggccttcatcatgaagaatcctaagtggatgaaggagcttcaaataatggtgaagaca
aagcagaaggctgagatccaggcgctctcttcgtttggcttccaatacataacggaagtt
tatctgccaaggaagttgaaggaaggagattggatttga
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