Thalassiosira pseudonana: THAPSDRAFT_7804
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Entry
THAPSDRAFT_7804 CDS
T01078
Name
(RefSeq) predicted protein
KO
K26938
MATE family, citrate exporter
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_7804
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
THAPSDRAFT_7804
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Gene cluster
GFIT
Motif
Pfam:
MatE
MurJ
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
7452377
NCBI-ProteinID:
XP_002292144
JGI:
7804
UniProt:
B8C7K2
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Position
8:complement(1175995..1177479)
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AA seq
456 aa
AA seq
DB search
MPRRYYRYLQPSYARGGGTSLTKRFSSNSNGDAINNNDDEASQIKLTKTFFAIALPAFFQ
LAAEPLAGLVDTAYLGRLGPEVLGGAGVAISAQYAMSKLYNDPLLRTSISLVASEDGKRG
GSGEGDDATTTTTSSSPATTTQSASQSLSIAVSSALLLAFTVGAIQLILYFLCASSILQG
MGVPPTSSMFHSAYSYLRVRALGTPAATLWLVTNGIFRGLGDTRTPFKYSLLFTGLNAIL
DPFFIFTCKQGASGAAAGTAIAQYVALVPLLYSLHRKVGVDVLGQWRELGGTLKEYLRAG
GLVFLRTVGKVLAYSVCARQAALLGSVAAAAYNLTFQLGFATTQICESVAVAVQTLLARE
IAGESNDKDEKAVTMRAKRLRHLINGSITVGGLVAGSLSLLTFFQKESVLRSLTTDAGIR
AASRIIFPAVLVTQGEPCLLQVVSCIVMTSFTSVSS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccacgacgatattatcggtatttgcaaccatcgtatgcaagaggaggaggcacttca
ttgaccaaacgcttttcatccaactccaacggcgacgctatcaacaacaacgatgacgaa
gcatcccaaatcaaactaaccaaaacattcttcgcaattgcccttccagccttttttcag
cttgccgctgagccattggcagggttagtcgacaccgcttacctcggtaggcttggtccc
gaagtattgggcggagcgggtgtggcaatctcggctcaatatgcgatgagcaaattgtat
aacgatcccttgttgaggacgagtattagtttggtggcgagtgaggatggcaagcgtggt
ggtagtggagaaggagatgatgcaacaaccacaaccacttcgtcatctccagcaacgaca
acacaatctgcatcacaatcactttccatagctgtatcctccgctctcctcctagcattc
accgtaggagcgattcaactcatcctctacttcctatgtgcatcctccatcctccaagga
atgggtgttcctcccacctcgtccatgtttcattctgcctattcctacctaagagtacgt
gcattgggaactccagcggcgacactctggttggttaccaatgggatatttcgggggttg
ggtgatacacgtactcctttcaagtactcattgctgtttactgggctaaacgctattctt
gatccgttcttcatcttcacgtgtaagcaaggggctagtggagcagctgcaggaactgcc
attgcacagtatgtagcgttggttccgttgttgtatagtttgcataggaaggttggagtg
gatgtgttgggtcagtggagggagctgggggggacgctgaaggagtatttgagagcgggg
ggtttggtgtttttgaggactgtggggaaggtattggcttattctgtttgtgctcgacag
gcggcactgcttggttcggtagcagctgcagcatacaacctcacattccaactaggtttt
gccaccacacaaatctgcgaatcagtagcagttgcagtgcaaactctattggcacgcgag
attgccggtgaaagcaatgacaaggacgaaaaggctgttacgatgagagctaaacgactg
aggcatctgattaacggatcgatcacagttggaggattggttgctggttcgttgagtttg
ttgacattcttccagaaagagtcagtattgaggagtttgacaactgatgctggtatcaga
gcggcgagcaggatcatcttcccggcagtgttggttactcaaggtgagccttgtcttttg
caagttgtgtcctgtatagttatgacatcttttacatcggtttcctcctaa
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