Tsukamurella pulmonis: TPB0596_35790
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Entry
TPB0596_35790 CDS
T08311
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul00260
Glycine, serine and threonine metabolism
tpul00460
Cyanoamino acid metabolism
tpul00630
Glyoxylate and dicarboxylate metabolism
tpul00670
One carbon pool by folate
tpul00680
Methane metabolism
tpul01100
Metabolic pathways
tpul01110
Biosynthesis of secondary metabolites
tpul01120
Microbial metabolism in diverse environments
tpul01200
Carbon metabolism
tpul01230
Biosynthesis of amino acids
tpul01240
Biosynthesis of cofactors
tpul04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TPB0596_35790 (glyA)
09102 Energy metabolism
00680 Methane metabolism
TPB0596_35790 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TPB0596_35790 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TPB0596_35790 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TPB0596_35790 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TPB0596_35790 (glyA)
Enzymes [BR:
tpul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TPB0596_35790 (glyA)
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Motif
Pfam:
SHMT
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BDD83816
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Position
complement(3587532..3588830)
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AA seq
432 aa
AA seq
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MSENSVNSASLAELDPEVAAAMNGELARQRDTLEMIASENFVPRAVLQAQGSVLTNKYAE
GYPGRRYYGGCEYVDVVEDLARNRAKELFGAEFANVQPHAGAQANAAVLQALMEPGETLM
GLDLAHGGHLTHGMRLNFSGKLYENVFYGVSKEDHRVDMDEVRKIALDSKPKVIVAGWSA
YPRHLDFAAFRSIADEVGAHLWVDMAHFAGLVAAGLHPSPVPHADVVSSTVHKTLGGPRS
GIILAKQEWAKKLNSAVFPGQQGGPLMHVIAAKAVALKVAGTEEFRAKQQRTLDGAKILA
ERLNGKDVADAGVTVLTGGTDVHLVLVDLRNSDLDGQQAEDLLHEVGITVNRNAVPFDPR
PPMVTSGLRIGTAALASRGFGEKEFTEVADIIGTALAQGKAADTAALRARVSALALEVPL
YEGLEDWGLLSR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacagcgtgaactccgcgtccctcgccgaactcgatcccgaggtcgccgcc
gccatgaacggcgagctcgcgcggcagcgcgacacgctggagatgatcgcctcggagaac
ttcgtgccgcgcgccgtgctgcaggcgcagggttccgtgctcaccaacaagtacgccgag
ggctaccccggccgccgctactacggcggctgcgagtacgtcgacgtggtcgaggacctg
gctcgcaaccgcgccaaggagctcttcggcgccgagttcgccaacgtccagccgcacgcc
ggcgcgcaggccaacgcagccgtgctgcaggcgctcatggagccgggcgagacgctgatg
ggcctcgacctggcgcacggcggccacctcacgcacggcatgcgcctgaacttctccggc
aagctctacgagaacgtcttctacggcgtgtccaaggaggaccaccgcgtcgacatggac
gaggtgcgcaagatcgccctcgactccaagccgaaggtgatcgtcgccggctggtccgcc
tacccgcgccacctcgacttcgcggccttccgctccatcgccgacgaggtgggcgcccac
ctctgggtcgacatggcgcacttcgccggcctcgtcgccgccggcctgcacccgagcccc
gtcccgcacgccgacgtggtcagctcgacggtgcacaagaccctcggcggcccccgctcc
ggcatcatcctggcgaagcaggagtgggccaagaagctcaactccgcggtcttccccggc
cagcagggcggcccgctcatgcacgtcattgccgccaaggccgtcgcgctcaaggtcgcg
ggcacggaggagttccgcgcgaagcagcagcgcacgctcgacggtgccaagatcctcgcc
gagcgcctgaacggcaaggacgtggccgacgccggcgtcaccgtcctcaccggcggcacc
gacgtgcacctcgtgctcgtcgacctgcgcaacagcgacctcgacggccagcaggccgag
gacctcctccacgaggtcggcatcaccgtcaaccgcaacgccgtgcccttcgacccgcgt
ccgccgatggtcacctcgggcctgcggatcggcaccgccgccctggccagccgcggcttc
ggcgagaaggagttcaccgaggtcgccgacatcatcggcaccgcgttggcgcagggcaag
gccgccgacacggccgcgctgcgcgcccgcgtgtcggcgctggcgctcgaggtcccgctg
tacgagggcctcgaggactggggtctcctctctcgctga
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