Theileria parva: TP01_0842
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Entry
TP01_0842 CDS
T00254
Name
(RefSeq) 5'-3' exonuclease
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
tpv
Theileria parva
Pathway
tpv03008
Ribosome biogenesis in eukaryotes
tpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TP01_0842
09123 Folding, sorting and degradation
03018 RNA degradation
TP01_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpv03019
]
TP01_0842
03009 Ribosome biogenesis [BR:
tpv03009
]
TP01_0842
03016 Transfer RNA biogenesis [BR:
tpv03016
]
TP01_0842
03036 Chromosome and associated proteins [BR:
tpv03036
]
TP01_0842
Messenger RNA biogenesis [BR:
tpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TP01_0842
mRNA degradation factors
5'-3' decay
5' exonucleases
TP01_0842
Ribosome biogenesis [BR:
tpv03009
]
Eukaryotic type
Pre-60S particles
RNases
TP01_0842
Transfer RNA biogenesis [BR:
tpv03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
TP01_0842
Chromosome and associated proteins [BR:
tpv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
TP01_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
Sterile
Motif
Other DBs
NCBI-GeneID:
3502945
NCBI-ProteinID:
XP_766363
UniProt:
Q4N7H8
LinkDB
All DBs
Position
1:complement(1771709..1774537)
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AA seq
534 aa
AA seq
DB search
MEHFLNAFSFLLIISTFHISLFPDGILCVNFANKKFSHNFINLPIIPSSKIIWMDDGELL
KGRGVDYFYVDMNAVIHSATHGNLFPVLMMEDQQRMRRIVTAMLNTFKLVNPKKMMYIGV
DGVCPSAKINQQRTRRFRLYKSSSSDNEYYKGENGEMKYKVNKLKVGAYDNVTFNPSYIS
PGTQFMSMMDSEIRNWIALQNYEGTWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNV
KKSTHLVYGLDADLVMLSLITKLPKMYILREEHNFTPHILSKEKPNPYFSKETDHVFKVY
ESFWNYDFSLLSFMAGNDFLPHLPTVELCNSSFNDLINMYYKMLPKLRGFLTQTYKINTS
RLQLLMKELCKNEFEYFKMKAMSEKISDYSDPKKYAKYYYENKCDIDFNNKKAIRKMCEQ
YIEVKSYKFMCFRGYFGRYRTITWGAQVGIGVINTTTRRWYQTWQRFQELQLSSLCQYFP
EDFEICEDGKDNEWEHVVKLPFLDTKHLCEVARSVNDELKYNNLYKRNDNNKKN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttctgaatgctttttcgtttttgttaattattagcacttttcatatttct
ttattcccggatggaatcttatgtgtcaattttgccaataaaaaattttcacataatttc
attaacctacctattataccgagttccaagattatatggatggatgatggagaacttctc
aagggcagaggagttgactacttttacgtcgatatgaatgctgtgatacattctgcaact
cacgggaatcttttcccagttctaatgatggaagatcagcaaagaatgagaaggatagtg
actgcaatgttgaatacttttaagcttgtgaatcccaagaagatgatgtacatcggtgtt
gatggcgtttgtccttcggcaaaaataaatcagcagcgcacaagaagatttcggctctac
aaatccagctcttccgataacgaatactacaaaggagagaatggagaaatgaaatataaa
gttaataaattaaaagttggagcatacgataatgttacatttaacccaagttacatatca
cctgggacacagttcatgtcaatgatggattcggaaattaggaactggatagcgcttcaa
aattatgaagggacctggaatgactgctatatagtttatagcggtacagatgtgcccggt
gaaggtgaacataaaatttatgatactattcgtaaaatggtggagttggatgacaatgtg
aaaaagtcgacacatttggtatatggattagacgctgatttagtaatgttgtcgctgatt
acaaaattgccaaaaatgtatattctaagagaagaacataattttacaccgcacatttta
tcaaaagagaaaccaaacccctacttttccaaagaaacagaccatgtattcaaggtgtat
gagagtttctggaactacgatttctctttactctcattcatggcgggaaatgacttttta
ccacatttaccaactgtggagctgtgtaacagtagctttaacgaccttataaatatgtac
tataaaatgttgcccaagttaagaggctttttgacacaaacatacaaaattaatacgtca
agattacaattactaatgaaagaactgtgtaaaaacgaatttgagtattttaagatgaaa
gcgatgtctgagaagataagtgattacagtgaccctaagaaatacgcgaaatactattat
gaaaataagtgcgacattgatttcaataataaaaaggcgattaggaaaatgtgtgaacaa
tacatcgaagtaaagtcttacaaatttatgtgttttaggggttattttggacgttatcgt
actatcacttggggtgcccaagttggaattggtgttataaataccactacgcgccgttgg
tatcagacttggcaaaggtttcaggaactacaattaagtagtttatgtcaatattttcca
gaagattttgaaatttgcgaagatgggaaggataacgagtgggaacacgtagtcaaattg
ccgttcctagataccaaacatctctgtgaagttgcacgaagcgtgaacgacgagcttaaa
tataataacttatacaaaaggaatgataataataaaaaaaattaa
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