Turneriella parva: Turpa_2031
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Entry
Turpa_2031 CDS
T02157
Name
(GenBank) helicase domain-containing protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tpx
Turneriella parva
Pathway
tpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Turpa_2031
09124 Replication and repair
03420 Nucleotide excision repair
Turpa_2031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpx03021
]
Turpa_2031
03400 DNA repair and recombination proteins [BR:
tpx03400
]
Turpa_2031
Enzymes [BR:
tpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Turpa_2031
Transcription machinery [BR:
tpx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Turpa_2031
DNA repair and recombination proteins [BR:
tpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Turpa_2031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFM12677
UniProt:
I4B5X0
LinkDB
All DBs
Position
complement(2067641..2069392)
Genome browser
AA seq
583 aa
AA seq
DB search
MASLDEKPLIVQSDKTLLLEVDHPMFENARSEISKFAELEKSPEYLHTYRITPLSLWNAA
ASKLKAEQIVDTLYKYSKYPVPQAVSADIYTQIGRYGKLKLDRDDRGDLVLKSTDPRYIA
EVIRNKKVQPYVEGPKNPNEVYVKADFRGHIKQALIKIGFPVEDVAGYEKGNDFKFELRP
KLGSGNDFVIRDYQESSIKAFYADGSVEGGSGVVVLPCGAGKTIVGIGAMHAVGAQTLIL
VTNTLSIRQWKNEILDKTTIQESEIGEYSGDKKEIKPITIATYNILTHRKKKGGDFTHFH
LFSSNNWGFIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLIGPKKY
DVPWKELEKKKWIAEARCVEIRTPLRSLMRGMYSVADDREKFRLSSENPEKMRVIGTLLY
HHRDDQVLVIGQYLDQLQRVSARFKIPLITGKTPLDERARLYEAFRTKQIRALVVSKVAN
FSIDLPDANVAIQISGTFGSRQEEAQRLGRVLRPKGNGNQALFYSVITNESSEEQFCRNR
QLFLTEQGYEYYIYSYQDFRDKFGTYVEIMKKMKELREGAPAK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttagatgaaaaaccgttgatcgtgcagtcagacaagaccctgctgctagaa
gtcgaccacccaatgtttgagaacgcgcgcagcgaaatttcgaagtttgctgaactcgaa
aaatcacccgaatatctgcacacgtaccgcatcactccgctttctctctggaacgcggcg
gcgtctaaactcaaggcagagcagatcgtcgacacgctctacaagtattcaaaatatcct
gtgccgcaggcggtgagcgcagacatctacacgcagattgggcgatatggcaaactcaaa
ctcgatcgcgacgaccgcggcgacctcgtactcaaatcgaccgacccgcgctacatcgcc
gaggttattcgcaacaagaaagttcagccttacgtcgaaggcccgaagaacccaaacgaa
gtttacgtcaaggccgactttcgcggccacatcaagcaggcactcatcaaaatcggcttt
cccgttgaagacgtcgcgggctacgaaaagggaaatgatttcaagtttgaactgcgcccg
aaactcggcagcggcaatgatttcgtgattcgcgactatcaagaatcttcgatcaaggcc
ttctacgccgacggcagcgtcgaaggtggctcgggtgtggtggtgctgccctgcggtgcc
ggcaaaaccatcgtcggcattggcgccatgcacgccgtcggtgcgcagacgctgattctc
gtgacgaacacactctcgatcaggcagtggaaaaacgaaattctcgacaagaccacgatt
caagaaagcgaaatcggcgaatactcgggtgacaaaaaagaaattaagccgatcacgatc
gcgacctacaacattctcacccaccgcaaaaaaaagggtggggatttcacacactttcat
ctcttttcgtcgaacaactggggttttatcgtctatgacgaggtgcacttgttgcccgcg
ccggtctttcgcatgacgagcgaactgcaggcaaagcgccggctgggcctcaccgcgacc
ctggtgcgcgaagacggtctcgaagaagacgtgttttctctgatcggcccgaaaaaatac
gacgtgccgtggaaagaactcgaaaagaaaaaatggatcgccgaagcgcgctgcgtcgaa
attcgcacgcctctgcgttcactgatgcgcggcatgtactcggtagccgacgaccgtgaa
aagtttcggctttcttcagagaaccctgaaaaaatgcgcgtgatcggcacgctgctttac
caccaccgcgacgatcaggtgctcgtgatcgggcaatacctcgaccagctgcagcgtgtt
tcggcgcgtttcaagattccgctgatcacgggcaaaaccccgctcgacgaacgcgcgcgc
ctctacgaagcttttcgcacaaaacagatcagggcactcgtggtttcgaaagtggcaaac
ttttcgatcgacctgcccgacgcgaatgtcgcgattcagatatcgggtacattcggtagc
cgccaagaagaggcgcagagactcgggcgcgtgctgcgtccgaagggcaacggcaatcag
gcgctgttctattctgtcatcaccaacgaatcgagcgaagaacagttttgccgcaatcgc
cagctgtttctcaccgagcagggttacgaatattatatctattcgtaccaggatttccgc
gataagttcggcacttacgtcgagatcatgaagaagatgaaagaactgcgcgagggtgcc
ccggcaaaatga
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