Thermacetogenium phaeum: Tph_c09340
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Entry
Tph_c09340 CDS
T02276
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03030
DNA replication
tpz03430
Mismatch repair
tpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tph_c09340 (dnaE)
03430 Mismatch repair
Tph_c09340 (dnaE)
03440 Homologous recombination
Tph_c09340 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpz03032
]
Tph_c09340 (dnaE)
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c09340 (dnaE)
Enzymes [BR:
tpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tph_c09340 (dnaE)
DNA replication proteins [BR:
tpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tph_c09340 (dnaE)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tph_c09340 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
T2SSK
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
AFV11163
UniProt:
K4LE69
LinkDB
All DBs
Position
973708..977181
Genome browser
AA seq
1157 aa
AA seq
DB search
MSANFVHLHVHSEYSLLDGASRLRDLVERAAELEMPALALTDHGVMYGVIDFYKLAKNAG
LHPVLGCEVYVAPRSRHDRNPHVDDSPHHLVLLAENERGYKNLMALVSAAHLDGFYYKPR
VDKELLARHSKGLIALTACLAGEIPRLLLSGEVDKAREVALHYREIFGRDNFYLEMMDHQ
MPEQEKVNAGLRKISGDTGIPLVVTNDSHYLRREDARIHDILLCIQTGKTLDDDNRLRFT
GQEFYLKSPEEMAALFPEDQDALNRTVEIAERCRVDFDFSQMHLPDFQVPEGYDLNSYLR
RLCEEGLERRYPDGVPQEARERLEHELRVIGQMGFSGYFLIVQDFVNWARKRGIPVGPGR
GSAAGSLVAYVLGITNIDPLRYGLLFERFLNPDRITMPDIDIDFCYERRNEVIDYVVKKY
GDEHVAQIITFGTMMARGAIRDVGRVLGMPLAEVDRIAKLVPEEPGVTLEKALQTPELSQ
LYEKNPDVRQLIDLARAIEGMPRHASTHAAGIVISPEPLVNYLPLQRNGDAVITQFPKET
VEELGLLKMDFLGLRTLTVIGDALQIIETRQGIKLDPNQFPLDDRRTYELLSSGETSGVF
QLESAGMRHILKNMKPRRFEDLIALVALYRPGPLGSGMVDDFIARKNGQTRVEYPHPLLE
PVLKETYGVILYQEQVMQISSVLAGFTMAEADSLRRAMGKKKPEVIAGMRKNFLEGAMKL
NVEPGKAGEIFDLMEHFAGYGFNKSHSAAYALISYQTAYLKANYPIAYMAALLTSFRNNS
DKISYYIQECRRMGLEILPPDVNESLENFTVVGDKKIRFGLTAVKNVGEGAVEAIIRARE
EGGRFTSLDDFCWRVDLRQVNKRVIESLILCGAFDTLGAHRSQLMAVLDECLDAAQSGRR
DREAQVDGQIALFDMLAGPQREPVKRPLPKLQEYPRRELLASEKEVLGFYVSGHPLDGCQ
ELLSKTTTTGIAGLANFQDGEHIRLGGVVTSLRRSTTRRGDGVIYFTLEDMEGSVEVIFF
PRNHLEDLSCLQEDAVILVEGRLSVQEDSYRLFGEKIRALELNSADFEHFLYIRLNSYAC
SPEVLERLRVLLTQHRGTTPVLLYFVEEKTLVQAGPAFCVEADSGLCYRIEELCGPGSCF
VMDKDSHLWSSVFTETA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaactttgttcaccttcatgtacacagtgagtacagcctcttagacggagcc
tcccgcctccgggatctggtggagagggcggcggaactggaaatgccggcactggccctc
accgaccacggggttatgtacggtgtgatcgacttttacaagctggcgaaaaatgcaggc
ttacatccggtgctgggatgtgaggtatatgtggcgccccggagccgtcatgacaggaat
ccccatgtggatgattctcctcatcacctggtgctcctggcggaaaatgagcggggctat
aagaatctgatggctttggtatccgccgcccacctggatggtttttattacaaaccgagg
gtagataaggagctgctggcacggcacagcaagggtttgatagccttaaccgcctgtctt
gccggggaaatccccaggctgctgttatccggagaggtcgataaagcgcgggaggtagcc
ctgcactaccgggagatcttcggcagggataacttttatctggaaatgatggatcaccag
atgcccgagcaggagaaggtgaacgccgggttgagaaaaatatccggggataccgggatc
cccctggtggtgaccaatgactcccactacctgcgccgagaagatgcccggatccacgat
attctcctctgcatacaaaccgggaagacgcttgatgacgataaccgcctccgctttacc
gggcaggagttttacctgaaatctccggaggagatggccgcgctctttccggaagaccag
gatgccctgaaccggaccgtggagattgcggaacgctgccgggtagactttgatttcagt
caaatgcatctgccggactttcaggtgcctgaggggtatgatttgaacagctatctgcgc
aggctctgcgaggagggcctggagcgccgctatccagacggggttcctcaagaagcccgg
gagcggctggagcacgaactgcgggtaatcgggcagatgggtttctccggttattttctg
atcgtccaggattttgttaactgggcgcgcaagagaggaataccggttgggccaggacga
ggttcggcggcgggttccctggtggcatacgtgcttggtattaccaatatcgatcctctg
aggtacggcctgctcttcgagcgctttctcaatccagaccggattaccatgcccgatatc
gacatcgacttctgttacgagcggcggaatgaggtcattgattatgtggtgaaaaagtac
ggagatgagcatgtggcccagattattacttttggtaccatgatggcgcggggagcaatc
cgggatgtggggcgggttctgggcatgcctctggcggaggttgacagaattgccaaactg
gtgcccgaagagcctggggtcaccctggaaaaggccctgcagaccccggagctcagtcag
ctctatgagaagaacccggatgtccggcagctgatcgaccttgcgcgggccatcgaaggg
atgccgcgtcacgcctccacccacgccgccgggatcgtcatttcgccggagcccttagtc
aattatttgcccctgcaacgaaacggagatgccgtcatcacacagtttcccaaagagact
gtggaggaactggggcttcttaagatggacttcctgggcctgcgcaccctgactgtcatc
ggggatgccctgcagataatcgagacccgtcagggtatcaagctggatcccaatcagttt
cccctcgatgaccggcgcacctatgagcttttaagctcaggggagacgagcggggtcttc
cagctggaaagcgcagggatgcgccatatcctgaagaatatgaagccgcgtcgctttgag
gatctgattgccctggttgctctttaccgtcccggtcccttgggaagcgggatggtggat
gacttcatcgccaggaagaacggccagacccgtgtagagtaccctcatcctttactggaa
ccggtgttgaaggagacctatggggtgattctctaccaggagcaggtgatgcagatctcc
agcgtgctggccggattcaccatggccgaggcggattccttgcggcgggcgatggggaaa
aagaagcccgaagtgatcgccgggatgaggaaaaactttctcgagggggcgatgaagctc
aacgttgaaccggggaaggcaggggagattttcgacctaatggagcacttcgcaggatac
ggtttcaataagagccattctgcggcctatgccctgatctcttaccagaccgcctacctg
aaggcgaactatcccatcgcctacatggcggcgcttcttacgagcttcaggaacaactcg
gacaagatttcttactatattcaggagtgccgcaggatggggttggagatcctgcctccg
gatgtcaacgagtccctggaaaacttcaccgtggtgggggacaagaaaatccgcttcggt
ttgactgccgtcaaaaatgttggtgagggagcagtagaggccatcataagggccagggaa
gagggtgggcgtttcacttctctggatgacttctgctggcgggtggacctgcgtcaggtg
aacaagcgcgtgattgagagcctcattctctgcggagcctttgataccctcggggcacat
cgctcccagctgatggcggttctcgatgagtgtctggatgctgcccagtcaggcagaagg
gatcgagaagctcaggtggacggtcaaattgcgctgtttgatatgctcgccggaccgcag
agggaaccggttaagcgccctctccctaagcttcaggagtacccgcggcgtgaacttttg
gccagcgagaaggaggttctggggttttatgtcagcggacatcccctcgacggctgtcag
gaacttctctccaaaacgacgactacggggattgccggtctggccaatttccaggacggg
gagcacatcaggctagggggggttgtcacctccttgaggcgcagcaccaccaggcgcggt
gatggagttatctactttactctggaggatatggaggggagtgtcgaagtcatcttcttt
cctcgcaatcacctggaggatctctcctgcctccaagaggatgcggttatcttggtagaa
gggaggctgagcgtacaggaggactcttatcgtcttttcggtgagaagatcagagctctg
gagttgaattcggccgattttgaacattttctctatataaggctcaattcttatgcctgt
agcccggaggtgctggagcggctgcgggttcttctgacccaacaccggggaactactccc
gttcttctctactttgtcgaggaaaagacgctggttcaggcaggccctgccttttgcgtg
gaggcggactccggactctgctaccggatagaggagttgtgcgggccgggttcctgtttt
gtgatggataaggattcccatttgtggtcatccgtctttactgaaacagcttag
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