Thermacetogenium phaeum: Tph_c11370
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Entry
Tph_c11370 CDS
T02276
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tph_c11370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpz03019
]
Tph_c11370 (pnp)
03016 Transfer RNA biogenesis [BR:
tpz03016
]
Tph_c11370 (pnp)
Enzymes [BR:
tpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Tph_c11370 (pnp)
Messenger RNA biogenesis [BR:
tpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tph_c11370 (pnp)
Transfer RNA biogenesis [BR:
tpz03016
]
Prokaryotic type
tRNA degradation factors
Tph_c11370 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
FliL
Motif
Other DBs
NCBI-ProteinID:
AFV11359
UniProt:
K4LTI9
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All DBs
Position
1153767..1155890
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AA seq
707 aa
AA seq
DB search
MQDTLIYQMVLGGRPLIFEFNKVAKQANGSVLVRYGDTVVLVTATVSKEPREGIDFFPLL
VDYEERLYAVGKIPGGFIKREGRPTEKAILSARLIDRPIRPLFPSGFRNDVQVVATVLSV
DQDCAPDVTAMNGASAALSVSDIPFAGPIGGVVVGRVDGEYVINPTVEQEKHSDMHLVVA
GTKDAVLMVEAGAKEVTEEAILQGIEFGHQAIKEIVALQEEIAQAIGKEKLDIPVFEVDP
QIESDVRGYVSDKIAAEVRNPDKQARQSALEALEKETIEHFAEIYPEQEKAVQEVFLKVL
KEIVREMILRERVRPDGRGLEEIRPISCEVGILPRAHGSGLFTRGQTQVLTVATLGTISE
EQILDGLGIEESKRYMHHYNFPPYSVGETRPIRGPGRREIGHGALAERALLPVLPDEDKF
PYTIRLVSEVLESNGSTSMASVCGSTLSLMDAGVPISAPVAGIAMGLVTADDTFAVLSDI
QGIEDALGDMDFKVAGTEEGITALQLDIKVKGISQDVLRKALSQAREGRLFILGKMKEVI
SAPRPNLSPYAPRIITMTIDPEKIRDVIGPSGKVIRKIIEETGVQIDIEDDGRVFIAATD
EEAGKNAVRIIENLTQDVEVGKIYLGKVVRLMDFGAFVEIIPGMFGSAGKEGLVHIFQLD
ERRVNRVRDVVKEGDEIIVKVIEIDKQGRINLSRKEAIKALRRKTEK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacgttgatatatcaaatggtgcttggtggccgtcccttaattttcgaattc
aacaaggtggccaaacaagccaacggttctgtgttggtacgctacggcgatacggttgtg
ctggttacggcaactgtatcaaaggagccgcgtgaggggatcgactttttcccgcttctc
gttgattatgaagaacgcctgtacgcagttggtaaaattcccggtgggtttatcaaaaga
gaaggtcggcctacggaaaaggccattttgtcggcccggctgatcgacaggccgatccgg
ccactttttccatccggttttcgtaacgatgtccaggttgttgctaccgttctttccgtg
gatcaggactgtgcccctgatgtaacagccatgaacggtgcttcggcggcgctttcagta
tccgatattccttttgcggggcccattggaggggttgtcgttgggcgggtggatggagag
tacgttatcaacccgacggtagaacaggaaaagcacagcgatatgcacttggtagttgcg
gggacgaaggatgcggttctgatggttgaggctggagccaaggaggttactgaggaagca
atactccaggggatcgaatttggacatcaggcaattaaggagattgtggctttacaagaa
gagattgcccaggccatcggtaaagagaagctggatatccccgtttttgaggtagatcct
cagattgaaagtgatgtcagagggtatgtcagcgataagattgctgcggaggtgaggaat
ccggataagcaggctcgccagagcgcccttgaagcgctggagaaagaaacgatcgagcac
tttgctgagatctatccggaacaggaaaaagccgtccaggaggtatttctcaaggttctc
aaggagatcgtgcgggagatgattttgcgggagagggttcgacccgacgggagagggctt
gaggagatcagaccgataagctgtgaggtcgggatcctaccgcgcgctcacggaagcggt
ctttttacacgcggccagacccaggttctcaccgtagcgacactgggtaccatcagcgag
gaacagatcctcgacggcctggggattgaagaatcgaaaagatatatgcaccattacaac
ttcccgccctacagtgtaggtgagaccaggccgatcaggggaccagggcgaagggagatc
ggccacggtgctctggcagagagggcattactgccggttcttcccgacgaagacaagttt
ccttataccatccggcttgtttccgaggttctggaatcgaacggatcgacatcgatggcc
agcgtttgtggaagcactctatctttgatggatgccggtgtgcccatctcagcacctgtt
gccggtattgctatggggcttgtcactgctgatgacacctttgcggttctgagcgatatc
caggggatcgaggatgccctgggggacatggattttaaggttgccggaactgaagaaggt
attactgcgctgcagttggacatcaaagtgaaaggcatttcccaggatgttttgcgaaaa
gccctcagccaggcccgggagggaagattgtttatcttaggtaaaatgaaggaagtcatc
agcgcaccgcgtcccaatctttcaccctacgctccgagaatcatcaccatgaccattgac
cctgaaaagatacgcgatgttatcgggccttccggtaaagtgatccgcaagatcatcgaa
gaaactggtgtccagattgacatcgaagatgacggcagggtttttattgcggcaaccgat
gaagaagcgggaaaaaatgccgtgcgcatcattgaaaacctgacccaggatgtcgaggtc
ggtaaaatatatctcggcaaggtcgtcagattaatggatttcggtgcctttgtggaaatc
atccccgggatgttcgggagcgcaggcaaagaggggcttgtgcacattttccagctggat
gaacgcagggtaaaccgtgtccgggatgtcgttaaagaaggggacgagattattgtcaag
gtaatcgaaattgataaacaggggcgaattaatctttcacgcaaggaagccatcaaagca
ctgcgcaggaaaacagaaaaataa
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