KEGG   Treponema rectale: DYE49_04475
Entry
DYE49_04475       CDS       T06877                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
trc  Treponema rectale
Pathway
trc03410  Base excision repair
trc03430  Mismatch repair
trc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:trc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DYE49_04475
   03430 Mismatch repair
    DYE49_04475
   03440 Homologous recombination
    DYE49_04475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:trc03400]
    DYE49_04475
DNA repair and recombination proteins [BR:trc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DYE49_04475
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DYE49_04475
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DYE49_04475
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Toprim
Other DBs
NCBI-ProteinID: QOS39759
UniProt: A0A7M1XJA7
LinkDB
Position
complement(1021827..1023416)
AA seq 529 aa
MISLQTINMSFLSQLLEHYHLNTKDLGARSAPGSFDNLKTPFELEDFKKVIERLKKAIST
KEKTVIYGDYDVDGLTATSIMKLALDETGLNPGFFIPSRYVEGYGLNVERVRQFALKGYH
LIITVDNGIAAVEAISEAKKLGMDVLVIDHHDVPATLPKFDCCFHQTYSHFLDYNCSAAS
LCFFVASFLLRRFDSYFATLAGIAVFSDVMPLVGNNLELAKMMKQFINKHHYRNLCYILG
NGSISYDDINFTLIPSFNSVGRIMKDSASTNNACRLLLERSDEEKIKKYANLLISCNVER
KEIVKNVTFLNQYTLSSDHGICLRTNDFSGLSGLFANKVMREKNVPVAIFSKDDINPEYL
VGSLRAPEGYKVDEFLKKYQSMIVAGGGHERAAGLTIREKDYYLVCTMFISECSKQALEM
EEKTEDVINITIEDLNEANYSIYESFMPFGEGFPAPSFKLTIEKERLKSTASHKCLMANS
DDQQGQVVIFDHIDEILNSEKPIFDIYGNLTMEIFRNSKKIKFLSTKIM
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgatttcattacaaacgattaatatgtctttcttatcacaattgcttgaacattatcat
ctgaatacaaaagaccttggtgccagaagtgcgccagggtcttttgataacttaaaaaca
ccttttgaattagaagattttaaaaaggttattgagcgtctcaagaaggcgatttccact
aaggaaaagactgttatctatggcgattatgatgtcgatggattaactgccacaagcatc
atgaaactcgctcttgatgagactggattgaatcctggtttctttattccttctcgttat
gttgaaggctatggactcaacgtggaaagagtaagacaatttgccttgaaaggatatcat
ctgattatcacggtggataatggtattgccgctgttgaggcgatttctgaggccaagaaa
ttaggtatggatgttttggtgattgatcatcatgatgttcctgctacacttcctaagttt
gattgttgtttccatcagacttattctcatttccttgattacaactgttctgccgcaagt
ctatgcttttttgtggcttctttcctgcttagaagatttgattcctactttgctactctg
gctgggattgcggtgttttctgatgtgatgccgcttgttggaaataacttggaattagcc
aaaatgatgaagcaatttatcaataaacatcattatcgcaatctatgttatattttagga
aatggaagtatttcctacgacgatatcaacttcactttgattcctagtttcaattctgtc
ggccgtatcatgaaggattccgcttcgacgaataatgcctgtcgcttgcttttagaaaga
agcgatgaagagaagattaaaaagtatgcaaatcttcttatcagctgtaatgttgagcgt
aaggagattgtcaaaaacgttaccttcttaaaccagtataccctttctagcgatcatgga
atctgtcttagaacgaatgatttttccggtctttctgggttatttgctaacaaggtgatg
agggaaaagaatgtcccggttgcgatcttttccaaagatgatatcaaccctgaatatctt
gttggttctcttcgtgctcccgaaggatataaagtggatgaatttttaaagaagtatcaa
agtatgattgttgctggcggtggacatgaaagagctgctggtctgacgatcagggaaaaa
gattattatcttgtctgtacgatgtttatttctgagtgttctaaacaggctttggagatg
gaagaaaagacggaagatgtgatcaatatcaccattgaggatctaaacgaagccaattat
tccatctatgaatcctttatgccatttggtgaaggatttcctgctcctagcttcaaattg
accatcgaaaaggaaagattgaagtcgactgcttctcataaatgcctgatggcaaatagt
gatgatcagcaaggacaggtcgtcatttttgatcacatcgatgaaattctgaattccgaa
aaaccaatttttgacatatacggaaatttgacaatggaaattttcagaaattcgaaaaaa
attaaattcctttcaaccaagattatgtaa

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