Treponema rectale: DYE49_04475
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Entry
DYE49_04475 CDS
T06877
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
trc
Treponema rectale
Pathway
trc03410
Base excision repair
trc03430
Mismatch repair
trc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DYE49_04475
03430 Mismatch repair
DYE49_04475
03440 Homologous recombination
DYE49_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trc03400
]
DYE49_04475
DNA repair and recombination proteins [BR:
trc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DYE49_04475
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DYE49_04475
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DYE49_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QOS39759
UniProt:
A0A7M1XJA7
LinkDB
All DBs
Position
complement(1021827..1023416)
Genome browser
AA seq
529 aa
AA seq
DB search
MISLQTINMSFLSQLLEHYHLNTKDLGARSAPGSFDNLKTPFELEDFKKVIERLKKAIST
KEKTVIYGDYDVDGLTATSIMKLALDETGLNPGFFIPSRYVEGYGLNVERVRQFALKGYH
LIITVDNGIAAVEAISEAKKLGMDVLVIDHHDVPATLPKFDCCFHQTYSHFLDYNCSAAS
LCFFVASFLLRRFDSYFATLAGIAVFSDVMPLVGNNLELAKMMKQFINKHHYRNLCYILG
NGSISYDDINFTLIPSFNSVGRIMKDSASTNNACRLLLERSDEEKIKKYANLLISCNVER
KEIVKNVTFLNQYTLSSDHGICLRTNDFSGLSGLFANKVMREKNVPVAIFSKDDINPEYL
VGSLRAPEGYKVDEFLKKYQSMIVAGGGHERAAGLTIREKDYYLVCTMFISECSKQALEM
EEKTEDVINITIEDLNEANYSIYESFMPFGEGFPAPSFKLTIEKERLKSTASHKCLMANS
DDQQGQVVIFDHIDEILNSEKPIFDIYGNLTMEIFRNSKKIKFLSTKIM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatttcattacaaacgattaatatgtctttcttatcacaattgcttgaacattatcat
ctgaatacaaaagaccttggtgccagaagtgcgccagggtcttttgataacttaaaaaca
ccttttgaattagaagattttaaaaaggttattgagcgtctcaagaaggcgatttccact
aaggaaaagactgttatctatggcgattatgatgtcgatggattaactgccacaagcatc
atgaaactcgctcttgatgagactggattgaatcctggtttctttattccttctcgttat
gttgaaggctatggactcaacgtggaaagagtaagacaatttgccttgaaaggatatcat
ctgattatcacggtggataatggtattgccgctgttgaggcgatttctgaggccaagaaa
ttaggtatggatgttttggtgattgatcatcatgatgttcctgctacacttcctaagttt
gattgttgtttccatcagacttattctcatttccttgattacaactgttctgccgcaagt
ctatgcttttttgtggcttctttcctgcttagaagatttgattcctactttgctactctg
gctgggattgcggtgttttctgatgtgatgccgcttgttggaaataacttggaattagcc
aaaatgatgaagcaatttatcaataaacatcattatcgcaatctatgttatattttagga
aatggaagtatttcctacgacgatatcaacttcactttgattcctagtttcaattctgtc
ggccgtatcatgaaggattccgcttcgacgaataatgcctgtcgcttgcttttagaaaga
agcgatgaagagaagattaaaaagtatgcaaatcttcttatcagctgtaatgttgagcgt
aaggagattgtcaaaaacgttaccttcttaaaccagtataccctttctagcgatcatgga
atctgtcttagaacgaatgatttttccggtctttctgggttatttgctaacaaggtgatg
agggaaaagaatgtcccggttgcgatcttttccaaagatgatatcaaccctgaatatctt
gttggttctcttcgtgctcccgaaggatataaagtggatgaatttttaaagaagtatcaa
agtatgattgttgctggcggtggacatgaaagagctgctggtctgacgatcagggaaaaa
gattattatcttgtctgtacgatgtttatttctgagtgttctaaacaggctttggagatg
gaagaaaagacggaagatgtgatcaatatcaccattgaggatctaaacgaagccaattat
tccatctatgaatcctttatgccatttggtgaaggatttcctgctcctagcttcaaattg
accatcgaaaaggaaagattgaagtcgactgcttctcataaatgcctgatggcaaatagt
gatgatcagcaaggacaggtcgtcatttttgatcacatcgatgaaattctgaattccgaa
aaaccaatttttgacatatacggaaatttgacaatggaaattttcagaaattcgaaaaaa
attaaattcctttcaaccaagattatgtaa
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