Thermocrinis ruber: THERU_00550
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Entry
THERU_00550 CDS
T03001
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
trd
Thermocrinis ruber
Pathway
trd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THERU_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trd03400
]
THERU_00550
Enzymes [BR:
trd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THERU_00550
DNA repair and recombination proteins [BR:
trd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THERU_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DDA1
Motif
Other DBs
NCBI-ProteinID:
AHE95389
UniProt:
W0DA83
LinkDB
All DBs
Position
complement(98497..99186)
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AA seq
229 aa
AA seq
DB search
MSLRKLIATASALRELGFDEVYITEDTTEEKREEPIKEEKEDKAELLRKLYQQMEEERKC
ILYEGASGYVFGEGDPNSPVVFIGEAPGEEEDKLKRPFVGRAGQYLNSKLEQVGLKREKV
YITNVVKSRPPGNRTPTREEMMTCLPYLRKEIEIIKPKLLVCLGSTAMKGILGKEYPITK
YRGQVFPYPYNPSIKVFLTYHPAYVLRNPSADKEFTEDLKKVVQLISQA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgagaaagctaatcgccactgcaagtgcattaagggagcttggctttgacgag
gtttatataacggaagatacaacggaagaaaagcgtgaagagcctatcaaggaggaaaag
gaagataaggctgagcttttgaggaagctttaccaacagatggaagaggaaagaaaatgt
attctctatgaaggtgccagtggctatgttttcggagagggagacccaaactccccggtg
gtctttataggggaggcgcccggagaagaagaagacaagctaaaaagaccctttgtggga
agggcaggacagtacttaaacagcaaattggaacaggtggggctaaagagggaaaaggtt
tatatcaccaatgtggtaaaatcaagaccacccggaaacaggacgcccacaagggaggag
atgatgacctgccttccttatcttagaaaggagatagaaataataaaacccaagcttttg
gtttgtctgggctcaaccgccatgaagggcattcttgggaaggagtatcctatcactaaa
tacaggggacaggtcttcccatacccttacaacccaagcataaaggttttcttgacttat
catcccgcttatgtgctaagaaatccctccgccgacaaagaattcacagaggacttaaaa
aaggtagttcagctcatttctcaagcctga
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