Trichoderma reesei QM6a: TRIREDRAFT_71468
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Entry
TRIREDRAFT_71468 CDS
T02991
Name
(RefSeq) replication factor A-like protein
KO
K07466
replication factor A1
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03030
DNA replication
tre03420
Nucleotide excision repair
tre03430
Mismatch repair
tre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIREDRAFT_71468
03420 Nucleotide excision repair
TRIREDRAFT_71468
03430 Mismatch repair
TRIREDRAFT_71468
03440 Homologous recombination
TRIREDRAFT_71468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tre03000
]
TRIREDRAFT_71468
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_71468
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_71468
Transcription factors [BR:
tre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
TRIREDRAFT_71468
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
TRIREDRAFT_71468
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
TRIREDRAFT_71468
MMR (mismatch excision repair)
TRIREDRAFT_71468
DSBR (double strand breaks repair)
HR (homologous recombination)
TRIREDRAFT_71468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF5521
DUF4503
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
18488100
NCBI-ProteinID:
XP_006961930
JGI:
Trire2_71468
UniProt:
G0R7W1
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MDAESALSRGCIAAIFNDPDQAAKQFPVPVMQCLQIKQMAPSGQGGDRYRLVMSDGVNYV
QTMLATQANHVIHDNKLERGCLTRVKQYTPNNLKGKNILVILDLEVIESLGVHEKIGDPV
VLEPRAAETTIAGNDFYGAKKEEQDVKPQMQQLQSMPSRSATHSGANIYPIEALSPFSSK
WTIKARVTFKSDIKTWHKPTGEGKLFSVNLLDESGEIKATGFNDQCDAFYDILQEGSVYY
ISSPCRVSLAKKQFSNLPNDYELAFERETVIEKAEDQTNVPQVRFNFCTIQELQSVEKDS
TVDVIGVLKEVGEVSEITSKKDGRPFQKRELTLVDDTGYSVRVTIWGKTASSFDANPESV
VAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAYRLKGWYDSVGRTDTFATHQNLAGVAG
ATGRKEEIKTIAQVKDENLGVDDQAYYTIKATIVFVKQDSFCYPACSNQGCNKKVTPMPD
GTWQCEKCSVSHDKPDYRYIMQLNVADHTSHQWLSCFDDTGRIIVGMSANELMELKENDD
AKFMAAFEAVNCKKLMFRCRAKMDNFGDTQRVRYQVMSASLIDYKSEGHKLVELIKQFNI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaatcagctctgtcccgaggctgcatcgcggccatcttcaatgaccccgat
caggccgcaaagcagttccccgtgcccgtgatgcagtgcctgcagatcaagcagatggcg
ccctcagggcaaggcggcgataggtatcgactggtcatgagcgacggagtcaactatgtc
cagaccatgctcgccacccaggcaaaccatgtcattcacgacaacaagctcgagaggggc
tgcctgacccgagtcaagcagtacacgcccaacaacttgaagggaaagaacatcctcgtt
attctggacctcgaggtcatcgagtctctcggcgtgcacgagaagattggtgacccagtg
gtgctcgaacccagggcggccgagacgacaattgccggaaacgacttttacggggcgaaa
aaggaggaacaggatgtcaagccacagatgcagcagcttcagtccatgccatcaaggtcg
gccacacactccggtgccaacatataccccatcgaggccctgtcgcccttttccagcaag
tggacgatcaaggctcgcgtgacattcaagtccgacatcaagacatggcacaagccgact
ggagaaggaaagctcttcagcgtcaacctcctggacgagagtggcgagatcaaggccacg
ggcttcaacgatcagtgcgacgccttctatgacattcttcaagagggatcggtctactac
atctctagcccctgcagagtctccctggcaaagaagcagttcagcaacctgccaaacgat
tacgagctcgcatttgagcgggagacggtcatcgaaaaggccgaggatcagaccaacgtg
ccccaggtcagattcaacttctgcaccatccaagaactgcagagcgtggagaaggacagc
accgtcgatgtgattggcgtgctgaaggaggtcggggaagtcagcgagattacatcaaag
aaggacggccgacccttccagaagcgtgaactgaccctggtggacgacaccggctactcg
gtgcgcgtcacaatctggggcaagacggcaagctcattcgacgccaacccagaatccgtg
gtggctttcaagggcaccaaggtctcagactttggcggcaagagcttgagtctgctgtcg
tcaggaaccatgactgtcgatcccgacatccccgatgcctaccgtctcaagggctggtat
gattcagttggccgaacagacacgtttgccacccatcagaacctggccggtgtggccggc
gcaactggccgaaaggaggagatcaagacaatcgcccaggtcaaggacgagaacctcggc
gtggacgaccaggcgtactacacgatcaaagccaccattgtctttgtcaagcaggacagc
ttctgctatcctgcttgctctaaccagggttgcaacaaaaaggtgacaccgatgccggat
ggtacatggcagtgcgagaagtgcagcgtatcacacgacaagccagactaccgctacatc
atgcagcttaacgtggcagatcacacaagccatcagtggctgagctgcttcgacgacacc
ggcaggataatagtcggcatgtctgccaacgagctgatggaactcaaggagaatgacgat
gccaagttcatggccgcgtttgaggccgtcaactgcaagaagctgatgtttagatgcaga
gccaagatggacaactttggtgatactcaaagggtgcggtatcaagtcatgagtgcttcg
ttgatagactacaagtcagagggccacaagctggtggagttgattaagcagttcaacatt
taa
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integrated database retrieval system
