Talaromyces rugulosus: TRUGW13939_06560
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Entry
TRUGW13939_06560 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
trg
Talaromyces rugulosus
Pathway
trg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_06560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_06560
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
TRUGW13939_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
55994055
NCBI-ProteinID:
XP_035345604
UniProt:
A0A7H8R086
LinkDB
All DBs
Position
III:complement(join(5136368..5136397,5136707..5138634,5138962..5140665,5140715..5141810))
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AA seq
1585 aa
AA seq
DB search
MPRGASFARGRRRAPARRGQDENFDIPEVYREMLAEEEARTAPESQDDDTTRPLKRRRVG
ERATAPNDEVAPAVSDDDSNARQMQTAYDLDASDVSDDESEDMEWEEVVIQQPGATSTQI
ADSNEPLQITLGQSDDKPKATIKRRKPVSGAEKRLRLDIHKVHVLCLLQHVYIRNFWCND
DETQRFLKRKILNRQIIGFLNPRETLAQFNRSTTFIDGLKQASEAFARQFKVTAPGMRRP
HWVEDSQAANERADLIMRDAETLLSKDDFRKQAEKLHGSRDFGAQLFCAMLRSAAVEARL
VCSIQVLPFSGVAKGMSPEKPKRDYIVISSDDDRNSAQTDKSSKPRRLGQPLFKSKMASS
SSYAAERPRNFLYSPYPVFWVEAFNEAVQKWVPVDPLTTKTVAKYTKFEPPASDRHNSMS
YVVAFEEDASARDVTNRYTKAFNAKTRKTRVESTKDGENWWTVVMNHFEKPFPEDRDQLE
TSELTAKAAAEPMPRNIQDFKDHPVYALERHLRRNEVIHPKRATGQVEVSKSSSKKNILE
PVYRRADVHVVRSADGWYRLGRDIKMGEQPLKRVTAAISKNETMEEFEDSEPVQTPLYAM
YQTELYRPPPVVKGKIPKNVYGNLDVYVPSMIPPGAFQLKHPEAARAARIIGIDFAEAVT
GFEFKGRRGTAVFNGIVAAIEYREALQEVIRCMEDEKIQAELDKRTREALRVWKHFLLKL
RIAEKVKAYASEEEDSEDGQNEQLSEDDTYEPEPEEGGGGFLPESDEDVAEPTSMSYNNT
DFVSDSNAGEIPPSDGGGFIPDDDEFGGGGFIPEVEITEDPRAVQPEHISEPATLTPAQP
RRKVPRYNLIVVSKKEQSDAVYSPPFDLTEDTPEPEKEDEDTTKGFSNSAPILIDSSTGP
GSPSVSVEVLSRSHSRHASRVPSPQLVEDDSDSKEKGRKTQRDDPTRTNTPSTPVESLAR
RTAYTRAVATTTKARRQRAEKNEIIPSSIIGSSLKPRRVRGLRDWDSQITLTQIVSQTES
PSVDRDLLEDDDNEGENGNTSPRRRDVEIIDLVNESEDEDESVPRTSQRKSSTLKKNRPR
HSPNRIPSTTFKSRKSVGFDSSAKKNTGFGKGKNDKFSKKGKDGNKTLTQMDFVRRYIPL
PDSDDDLKSYDEPLASTRNSPRVAPPPNIEETEEGRNEFPTPRKRRKLSNEPASVTARPP
PTTLPQTPQKIRKFEIPSSQTPETPRQEVLPAADVHNIPRLPLEAFSTKTSKTSQEQLQR
DLSDAQTQSSLRQNSTVPETAENSANENTNGPSVDSLDQSTASAFDSTLPSGADEIQQPS
ELPELPPSSFSKTVVYDTDDETEYSDFEDDRLLHSPKQANEPTPTVKRSSNVEEDNCIPN
SDDSNDLPPHVPNSGTDLDINYNTFSDTALPSDASLYYRRPAQYTQYPTEPVPMLNSQKM
AELFPIEETEDPPSMPKAPPSLDKETTAQFKNEHSDILCPQTQSDEAEKSTQMVPESSPI
ARKHEEETSDSMMPPPREAPVVLVESSQLVDRINRQNSSSLGTGPALPRLLSARDFLTDS
VMESVPPPPWVLSQDSTPLNNFALI
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcggggccagctttgcccgaggccgccggcgcgcacctgctcgtcgtggccaa
gatgagaattttgatattccagaggtatatcgagaaatgctcgccgaggaagaagcgcgc
actgcgccggagtcacaagacgatgatactactagacccttgaaacgtcgcagggtggga
gaaagggcgacggcgccgaatgacgaagttgcgccggctgtatcagatgatgatagcaat
gcaagacaaatgcagactgcgtatgacctggatgctagcgatgtatccgatgacgagtca
gaggatatggagtgggaagaagttgtgattcagcaaccaggcgcaacaagcacccaaata
gcggatagcaacgagcctctgcagattacgcttggccagtctgacgataaacccaaagca
actatcaagagacgcaagcctgtctcgggcgctgaaaagaggctacgattggatattcat
aaagttcatgtgctctgtctgttgcagcacgtttatattcgcaatttctggtgtaatgac
gacgagactcaaaggtttctcaagaggaagattttgaataggcaaataattgggtttttg
aatcctagggagacattggcacagttcaatcgctcaaccacgtttatagatggccttaag
caggccagcgaagcctttgcacgacaattcaaggtgacagcccccggtatgcgacggccg
cattgggttgaagattcgcaagctgcgaacgagagggcggacctgatcatgcgtgatgcc
gagactcttctatccaaggacgattttcgaaaacaggcagagaagcttcatggctcccgt
gactttggtgcgcagctgttctgcgctatgcttcgatccgcagccgtggaagctcggctg
gtatgctctatacaagtactccccttttcgggtgtggccaagggaatgagtcctgagaag
ccaaagagagattatattgttatatcttccgacgacgatcgaaattcagcgcagactgat
aagtctagcaaaccgaggagactgggccaacctttattcaaatcaaagatggcctcttcc
tcgtcatatgctgctgaacggccgcgaaactttctctactccccttatccagtcttttgg
gtagaggcattcaacgaggcagtccagaaatgggtccccgttgacccgttgaccaccaaa
acagttgcaaagtataccaaattcgagcccccagcgagcgacagacacaatagtatgtct
tatgtggtcgcattcgaagaagatgcttctgccagagacgtcactaaccgctatacgaaa
gcgttcaacgcaaagacccgcaaaacacgggtggaaagcaccaaggatggcgaaaattgg
tggacagttgtaatgaatcatttcgagaagccctttcctgaagatcgggatcagctcgag
acgagcgaacttactgccaaggctgcagctgagccgatgccgcggaatatccaagacttt
aaagaccacccggtatatgcactggaaagacatcttcgtcgaaatgaagtcatacacccc
aaaagagccactggccaagtcgaagtgagcaagtcgagctctaaaaagaatatcttggaa
cctgtttatcgacgcgctgatgtgcatgttgttagaagtgccgatggatggtaccgtcta
ggaagggacataaaaatgggggagcagcctctcaaacgggttacagcagccatctcaaaa
aatgagacaatggaagagtttgaagattcggaacctgtgcagacacctttatatgctatg
taccaaaccgagctttatcgccctccgccagtggtcaagggaaagattccaaagaacgtg
tacgggaatttggatgtctatgtcccgagcatgattccacctggggcttttcaactcaaa
catcccgaagcagctcgagcggcgcggatcattggcattgattttgcagaagcagttacg
ggattcgagttcaaagggcgccgaggaacagcagtattcaacggcatcgttgcagctatt
gaataccgagaggcactccaagaggttattcgatgtatggaggatgagaagatccaagcc
gaactagacaagagaacgcgggaagcattacgtgtgtggaaacactttttactgaaattg
cgaatcgccgaaaaagtcaaggcttatgcatctgaggaagaggattctgaagacggccaa
aatgagcagctatcagaggatgatacatacgagccggagcctgaagaaggaggagggggt
ttcctcccggagtcggacgaggacgttgctgagcctaccagtatgtcctataacaacaca
gactttgtctcggacagcaatgccggtgaaattccaccaagtgatggcggcgggttcatc
cctgatgacgatgagtttggtggaggagggtttatacccgaagtcgagatcacagaagat
cccagagctgttcagcccgagcacatttccgagcccgctactttgaccccggcgcaaccg
agaagaaaagtgcctcgatacaatctaattgttgtctcgaagaaagagcagtctgacgct
gtatatagtccaccatttgatctaacagaagatacgccagagcccgagaaagaagacgaa
gacaccaccaaaggattctccaacagcgcgcccatcttgattgactcgtctaccggcccg
ggatctccctctgtcagcgtggaagtcttgtccagatcccactcccgtcatgcatcgcgt
gtaccatctccgcaacttgtagaggatgattcagatagcaaagaaaagggccggaaaacc
cagcgcgatgacccaactcgaacgaacaccccaagcacaccggttgagtccctggcgaga
cgcacggcatacactagagcagtcgcaacgactacaaaggcgagacgacaaagggcggag
aagaacgagataataccatcgtcgattattggatcgagtttgaaaccacgcagagttcgt
gggttgcgagattgggatagtcagattactctgacgcagattgtctcccaaacagagtcg
cctagtgtagatagggatttgttggaagacgatgataacgagggcgagaacggcaacaca
tcccccagaagacgagacgtcgaaataattgatcttgtgaatgagtcagaggatgaggac
gagtcggtacctcgcacaagtcaacgaaaatcttctactttgaaaaagaacagaccccga
cactcgcctaacaggatcccgtccaccacgttcaagagtcgcaaatcagttggatttgat
agcagtgcgaaaaaaaataccggttttggaaagggcaaaaatgacaaattctccaagaaa
ggaaaggatgggaacaagaccctcacgcaaatggattttgtgcggcgctatatacctctg
ccagactcagatgacgacctgaaatcctacgatgaaccattagcatcgaccagaaactcg
cctagagtggctccaccaccgaatatagaggaaacagaagaaggcaggaacgaatttccg
accccgaggaagagacgaaagctgagcaacgagccagcctccgtcacagcgaggcctcct
cccaccaccctaccccaaacacctcagaaaatacgcaaattcgaaatcccctcctcacag
acacccgaaacacctcgacaagaagttctccccgctgcagatgtccataacataccccgt
cttcctctagaagcattctctacgaaaacgtcaaaaacaagtcaagaacaactacagaga
gatctgagcgacgcgcagacacagtcatcattgcggcaaaattcgactgttcctgaaacc
gcagaaaactcggccaatgaaaataccaatggaccaagcgtggactctttggatcaatct
actgcctccgcttttgacagtactttaccttccggagcagatgaaatacagcaaccgtcc
gagttgccagaactaccaccatcgtcgttttccaaaacagtggtctacgacacggatgac
gagaccgagtatagcgattttgaggacgacagactcctccattcgccgaagcaggcaaat
gaaccgaccccaacggtcaaacgctcgagtaatgtcgaggaagacaactgtatcccaaat
agcgatgactccaatgatttacctcctcatgtgcccaactctgggactgacctagacata
aactacaacaccttttccgataccgcactaccctcagacgcctcgttgtattatcgcaga
ccggctcagtacacccagtacccgaccgagcctgtaccgatgttaaacagtcagaaaatg
gccgagttattccccattgaagagactgaggatccgccttcgatgcccaaggctccacca
tctttggacaaagaaacgacggcgcagttcaagaatgagcattcggacattctttgtcca
caaacccagagtgatgaggcggaaaaatcaacgcaaatggtcccggaatcttctccaatc
gccaggaagcacgaagaggagacgagcgacagcatgatgccccctccaagagaggcgcct
gtcgtactggttgagtcgtcgcagcttgtggacagaatcaatagacagaatagcagcagt
cttggcacaggcccagctctgcctcgactgctttctgctagagactttctcacagatagc
gtgatggagagtgttccaccgcctccgtgggtcttgagccaggacagtacaccactcaat
aattttgctttgatttaa
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integrated database retrieval system
